| Cntn3 | Q07409 | Snord43-201 | ENSMUST00000199549 | 108 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm18346-201 | ENSMUST00000216782 | 325 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Mir34a-201 | ENSMUST00000083559 | 102 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Mir93-201 | ENSMUST00000083593 | 88 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm45257-201 | ENSMUST00000210301 | 3998 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Olfr1454-202 | ENSMUST00000213806 | 3906 nt | APPRIS P1 TSL 5 BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24670-201 | ENSMUST00000104154 | 132 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Snora36b-201 | ENSMUST00000104383 | 132 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24475-201 | ENSMUST00000157435 | 143 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24718-201 | ENSMUST00000157521 | 136 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm23644-201 | ENSMUST00000157856 | 77 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm27792-201 | ENSMUST00000184031 | 115 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22576-201 | ENSMUST00000083733 | 104 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25409-201 | ENSMUST00000083764 | 131 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Cd209e-201 | ENSMUST00000033888 | 1802 nt | APPRIS P1 TSL 1 (best) BASIC | 2.67 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Ppp4r3c-ps-201 | ENSMUST00000151416 | 2445 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25878-201 | ENSMUST00000104327 | 93 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm14709-201 | ENSMUST00000121225 | 304 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22558-201 | ENSMUST00000157326 | 95 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm26411-201 | ENSMUST00000157668 | 107 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25558-201 | ENSMUST00000158083 | 106 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22387-201 | ENSMUST00000158191 | 131 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Snord7-201 | ENSMUST00000083781 | 97 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Olfr711-203 | ENSMUST00000216335 | 4724 nt | APPRIS P1 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Zfp160-201 | ENSMUST00000088811 | 3791 nt | APPRIS P1 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm14917-201 | ENSMUST00000118872 | 2105 nt | BASIC | 2.65 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm42718-201 | ENSMUST00000197319 | 2681 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Mir92-1-201 | ENSMUST00000102108 | 80 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23803-201 | ENSMUST00000104610 | 132 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24274-201 | ENSMUST00000116787 | 124 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm14568-201 | ENSMUST00000119321 | 294 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm14937-201 | ENSMUST00000119709 | 208 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24894-201 | ENSMUST00000122744 | 118 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25646-201 | ENSMUST00000178527 | 79 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm26741-201 | ENSMUST00000180473 | 87 nt | APPRIS P1 BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | AC147101.2-201 | ENSMUST00000219756 | 184 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23509-201 | ENSMUST00000083080 | 160 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Cdh4-202 | ENSMUST00000098996 | 69 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Olfr509-202 | ENSMUST00000213756 | 3547 nt | APPRIS P1 TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Slco6c1-201 | ENSMUST00000027569 | 2747 nt | APPRIS P2 TSL 1 (best) BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm44489-201 | ENSMUST00000104619 | 97 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24246-201 | ENSMUST00000157315 | 132 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25884-201 | ENSMUST00000157782 | 62 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Olfr1319-ps1-201 | ENSMUST00000208550 | 274 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Olfr791-202 | ENSMUST00000217228 | 2502 nt | APPRIS P1 TSL 5 BASIC | 2.64 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm44177-201 | ENSMUST00000204338 | 2667 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm45178-201 | ENSMUST00000207744 | 4110 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm15289-201 | ENSMUST00000117793 | 244 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23898-201 | ENSMUST00000158111 | 103 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24075-201 | ENSMUST00000158175 | 72 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25098-201 | ENSMUST00000177580 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23356-201 | ENSMUST00000177610 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24027-201 | ENSMUST00000177611 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22511-201 | ENSMUST00000177628 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22630-201 | ENSMUST00000177781 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23560-201 | ENSMUST00000177782 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25462-201 | ENSMUST00000177833 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm26059-201 | ENSMUST00000177865 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22255-201 | ENSMUST00000177933 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25146-201 | ENSMUST00000177976 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25523-201 | ENSMUST00000178044 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24585-201 | ENSMUST00000178104 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22627-201 | ENSMUST00000178127 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22912-201 | ENSMUST00000178242 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24866-201 | ENSMUST00000178338 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22524-201 | ENSMUST00000178357 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25710-201 | ENSMUST00000178367 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23575-201 | ENSMUST00000178406 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24872-201 | ENSMUST00000178434 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22449-201 | ENSMUST00000178924 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24702-201 | ENSMUST00000178965 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24206-201 | ENSMUST00000179011 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24528-201 | ENSMUST00000179164 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22909-201 | ENSMUST00000179190 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm26334-201 | ENSMUST00000179403 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25463-201 | ENSMUST00000179405 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25742-201 | ENSMUST00000179530 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25209-201 | ENSMUST00000179576 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm26392-201 | ENSMUST00000179661 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25230-201 | ENSMUST00000179740 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm26434-201 | ENSMUST00000179778 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25741-201 | ENSMUST00000179825 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24759-201 | ENSMUST00000179827 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24219-201 | ENSMUST00000179861 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Mir369-201 | ENSMUST00000083627 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm23254-201 | ENSMUST00000097244 | 79 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Olfr868-201 | ENSMUST00000212767 | 4196 nt | APPRIS P1 TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Agmo-201 | ENSMUST00000049874 | 2423 nt | APPRIS P1 TSL 1 (best) BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm6377-201 | ENSMUST00000060013 | 2793 nt | APPRIS P1 TSL 1 (best) BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm22486-201 | ENSMUST00000116815 | 137 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Rhox11-ps3-201 | ENSMUST00000121166 | 233 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm14671-201 | ENSMUST00000121790 | 262 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25771-201 | ENSMUST00000158565 | 144 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25769-201 | ENSMUST00000158569 | 127 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm24668-201 | ENSMUST00000158935 | 104 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm27979-201 | ENSMUST00000185126 | 56 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm43626-201 | ENSMUST00000198575 | 162 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | AC127578.1-201 | ENSMUST00000227289 | 93 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Mir151-201 | ENSMUST00000083678 | 68 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| Cntn3 | Q07409 | Gm25684-201 | ENSMUST00000083941 | 107 nt | BASIC | 2.62 | □□□□□ -1.99 | | |