Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm24559-201ENSMUST00000157519 121 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Gm25558-201ENSMUST00000158083 106 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Gm23854-201ENSMUST00000158378 108 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Gm29604-201ENSMUST00000187176 163 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Mir7657-201ENSMUST00000196051 57 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Mir6925-201ENSMUST00000197857 70 ntBASIC2.39□□□□□ -2.03
Usp4P35123 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.39□□□□□ -2.03
Usp4P35123 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Gm8508-201ENSMUST00000061226 363 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Gm25627-201ENSMUST00000084003 153 ntBASIC2.39□□□□□ -2.03
Usp4P35123 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Usp4P35123 Gm24049-201ENSMUST00000102409 100 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Mir669d-201ENSMUST00000104644 121 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm15069-201ENSMUST00000117792 192 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm14502-201ENSMUST00000118154 113 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm15068-201ENSMUST00000119796 192 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm15536-201ENSMUST00000121411 114 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm26091-201ENSMUST00000122704 82 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.38□□□□□ -2.03
Usp4P35123 Gm24769-201ENSMUST00000158506 129 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm27792-201ENSMUST00000184031 115 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm28669-201ENSMUST00000188400 100 ntBASIC2.38□□□□□ -2.03
Usp4P35123 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm7214-201ENSMUST00000222428 272 ntBASIC2.38□□□□□ -2.03
Usp4P35123 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Usp4P35123 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.38□□□□□ -2.03
Usp4P35123 Gm22003-201ENSMUST00000101885 107 ntBASIC2.37□□□□□ -2.03
Usp4P35123 Gm22756-201ENSMUST00000180118 107 ntBASIC2.37□□□□□ -2.03
Usp4P35123 Gm26054-201ENSMUST00000083037 107 ntBASIC2.37□□□□□ -2.03
Usp4P35123 Gm24492-201ENSMUST00000083798 107 ntBASIC2.37□□□□□ -2.03
Usp4P35123 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usp4P35123 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usp4P35123 Gm27399-201ENSMUST00000184250 78 ntBASIC2.36□□□□□ -2.03
Usp4P35123 Gm44325-201ENSMUST00000196757 77 ntBASIC2.36□□□□□ -2.03
Usp4P35123 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.36□□□□□ -2.03
Usp4P35123 Gm6109-201ENSMUST00000223297 348 ntBASIC2.36□□□□□ -2.03
Usp4P35123 Gm25987-201ENSMUST00000083234 107 ntBASIC2.36□□□□□ -2.03
Usp4P35123 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.36□□□□□ -2.03
Usp4P35123 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp4P35123 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp4P35123 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Usp4P35123 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp4P35123 Gm44489-201ENSMUST00000104619 97 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Gm24937-201ENSMUST00000122597 134 ntBASIC2.35□□□□□ -2.03
Usp4P35123 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Gm26084-201ENSMUST00000157903 104 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Gm23898-201ENSMUST00000158111 103 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Gm25820-202ENSMUST00000197479 128 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Gm45791-201ENSMUST00000212908 352 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Snora33-201ENSMUST00000093556 129 ntBASIC2.35□□□□□ -2.03
Usp4P35123 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Usp4P35123 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Usp4P35123 Gm15281-201ENSMUST00000125181 351 ntBASIC2.34□□□□□ -2.03
Usp4P35123 Gm23548-201ENSMUST00000158963 106 ntBASIC2.34□□□□□ -2.03
Usp4P35123 Gm23504-201ENSMUST00000158988 95 ntBASIC2.34□□□□□ -2.03
Usp4P35123 Gm44477-201ENSMUST00000199661 110 ntBASIC2.34□□□□□ -2.03
Usp4P35123 Snora69-201ENSMUST00000083708 131 ntBASIC2.34□□□□□ -2.03
Usp4P35123 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.34□□□□□ -2.03
Usp4P35123 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.34□□□□□ -2.03
Usp4P35123 Gm22752-201ENSMUST00000102083 109 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm13588-201ENSMUST00000120026 135 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm23390-201ENSMUST00000157393 106 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm42855-201ENSMUST00000197388 253 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Mir3961-201ENSMUST00000198795 59 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm24038-201ENSMUST00000082872 159 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm25697-201ENSMUST00000082902 98 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm23095-201ENSMUST00000083446 107 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.33□□□□□ -2.04
Usp4P35123 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
Usp4P35123 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm25089-201ENSMUST00000102015 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm26154-201ENSMUST00000102339 96 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.32□□□□□ -2.04
Usp4P35123 Gm22768-201ENSMUST00000158366 153 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24333-201ENSMUST00000175101 84 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm25840-201ENSMUST00000177821 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24952-201ENSMUST00000177909 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23682-201ENSMUST00000178146 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24652-201ENSMUST00000178223 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm22629-201ENSMUST00000178272 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24021-201ENSMUST00000178435 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm22274-201ENSMUST00000178441 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm22050-201ENSMUST00000178442 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23688-201ENSMUST00000178502 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23944-201ENSMUST00000178607 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm26283-201ENSMUST00000178625 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm25452-201ENSMUST00000178776 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23286-201ENSMUST00000178963 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm22640-201ENSMUST00000179035 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm25984-201ENSMUST00000179129 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm25585-201ENSMUST00000179469 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm26374-201ENSMUST00000179737 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24040-201ENSMUST00000179786 79 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms