Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm23466-201ENSMUST00000157133 106 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm22145-201ENSMUST00000157396 148 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm23101-201ENSMUST00000157550 137 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Snord11-201ENSMUST00000158468 84 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm24837-201ENSMUST00000158683 81 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm25247-201ENSMUST00000175475 90 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm23002-201ENSMUST00000179221 107 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm25788-201ENSMUST00000082721 131 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm24615-201ENSMUST00000083268 113 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Col2a1P28481 Gm24079-201ENSMUST00000104352 132 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm24640-201ENSMUST00000116949 126 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm22626-201ENSMUST00000116990 126 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm24594-201ENSMUST00000122502 99 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm25424-201ENSMUST00000157612 58 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm23584-201ENSMUST00000157655 129 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Mir1951-201ENSMUST00000157981 89 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm25901-201ENSMUST00000158494 130 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm24761-201ENSMUST00000179589 127 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm24488-201ENSMUST00000179934 127 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm25701-201ENSMUST00000179988 127 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm26431-201ENSMUST00000180199 127 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Gm45116-201ENSMUST00000207392 275 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.17□□□□□ -2.22
Col2a1P28481 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Col2a1P28481 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col2a1P28481 Mir466h-201ENSMUST00000104748 81 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm25316-201ENSMUST00000116826 118 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm26279-201ENSMUST00000157095 102 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm22217-201ENSMUST00000157556 313 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm26482-201ENSMUST00000158015 62 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm23892-201ENSMUST00000158105 130 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm25491-201ENSMUST00000158733 308 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm25749-201ENSMUST00000175485 111 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col2a1P28481 Gm27421-201ENSMUST00000184729 167 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Gm22299-201ENSMUST00000082663 136 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Mir29c-201ENSMUST00000083614 88 ntBASIC1.16□□□□□ -2.22
Col2a1P28481 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col2a1P28481 Gm23901-201ENSMUST00000157570 107 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Gm22338-201ENSMUST00000157715 129 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Gm2962-201ENSMUST00000159266 336 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Gm9156-201ENSMUST00000189660 463 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Snora19-201ENSMUST00000082962 132 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Gm23658-201ENSMUST00000083233 132 ntBASIC1.15□□□□□ -2.23
Col2a1P28481 Gm25495-201ENSMUST00000104431 131 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 Gm25565-201ENSMUST00000104605 105 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 Gm13577-201ENSMUST00000121365 205 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 Gm24595-201ENSMUST00000122501 110 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 Gm25513-201ENSMUST00000083861 162 ntBASIC1.14□□□□□ -2.23
Col2a1P28481 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Col2a1P28481 Gm26135-201ENSMUST00000101993 72 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm6897-201ENSMUST00000117714 138 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm14758-201ENSMUST00000119104 138 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm23854-201ENSMUST00000158378 108 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm22075-201ENSMUST00000158599 192 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm24333-201ENSMUST00000175101 84 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Col2a1P28481 Snord50b-201ENSMUST00000178497 72 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Col2a1P28481 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm24412-201ENSMUST00000083426 109 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm24762-201ENSMUST00000083689 104 ntBASIC1.13□□□□□ -2.23
Col2a1P28481 Gm24121-201ENSMUST00000102029 106 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Mir293-201ENSMUST00000104841 80 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm23571-201ENSMUST00000180073 127 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm33866-201ENSMUST00000196911 289 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.12□□□□□ -2.23
Col2a1P28481 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm24457-201ENSMUST00000083196 105 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Col2a1P28481 Mir466p-201ENSMUST00000103925 89 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Col2a1P28481 Gm6985-201ENSMUST00000121255 271 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm25914-201ENSMUST00000157618 153 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm22768-201ENSMUST00000158366 153 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.12□□□□□ -2.23
Col2a1P28481 Gm27585-201ENSMUST00000183717 199 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm28912-201ENSMUST00000189001 234 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm29014-201ENSMUST00000191422 326 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Mir3961-201ENSMUST00000198795 59 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
Col2a1P28481 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Gm22744-201ENSMUST00000083444 65 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Mir27b-201ENSMUST00000083541 73 ntBASIC1.12□□□□□ -2.23
Col2a1P28481 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Col2a1P28481 Mir374b-201ENSMUST00000102314 95 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm23655-201ENSMUST00000122627 105 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Mir1967-201ENSMUST00000157789 82 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm22767-201ENSMUST00000158365 165 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm20477-201ENSMUST00000174028 280 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm25730-201ENSMUST00000178753 165 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm22259-201ENSMUST00000178926 107 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.11□□□□□ -2.23
Col2a1P28481 Gm23370-201ENSMUST00000199545 130 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms