Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm25633-201ENSMUST00000178565 107 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Gm23186-201ENSMUST00000180078 107 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Cdx1P18111 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Gm44352-201ENSMUST00000196358 110 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Gm23242-201ENSMUST00000083055 107 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Gm22743-201ENSMUST00000083445 133 ntBASIC0.5□□□□□ -2.33
Cdx1P18111 Gm22021-201ENSMUST00000104353 107 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm23492-201ENSMUST00000116837 115 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm11856-201ENSMUST00000118712 276 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm14491-201ENSMUST00000121919 199 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm16265-201ENSMUST00000134558 108 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm22814-201ENSMUST00000157452 104 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm23898-201ENSMUST00000158111 103 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm24737-201ENSMUST00000158861 100 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Cdx1P18111 Gm26285-201ENSMUST00000177923 107 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm44063-201ENSMUST00000203307 376 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
Cdx1P18111 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm23622-201ENSMUST00000082460 107 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm26111-201ENSMUST00000083969 106 ntBASIC0.49□□□□□ -2.33
Cdx1P18111 Gm14536-201ENSMUST00000118324 138 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm15027-201ENSMUST00000120922 138 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm15379-201ENSMUST00000121224 648 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm26255-201ENSMUST00000122492 103 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm24595-201ENSMUST00000122501 110 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm25825-201ENSMUST00000157091 124 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Mir1961-201ENSMUST00000158643 112 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm20923-201ENSMUST00000190009 319 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm28330-201ENSMUST00000190353 171 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm21088-201ENSMUST00000190875 316 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm37338-201ENSMUST00000191986 127 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm29818-201ENSMUST00000218070 165 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Gm23039-201ENSMUST00000083870 161 ntBASIC0.48□□□□□ -2.33
Cdx1P18111 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm23536-201ENSMUST00000157541 134 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm26484-201ENSMUST00000158018 106 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm26159-201ENSMUST00000158968 104 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm20391-201ENSMUST00000174722 106 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.47□□□□□ -2.33
Cdx1P18111 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm22248-201ENSMUST00000082482 150 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm24316-201ENSMUST00000083041 107 ntBASIC0.47□□□□□ -2.33
Cdx1P18111 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Cdx1P18111 Gm26421-201ENSMUST00000104279 132 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm24275-201ENSMUST00000116780 146 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm13560-201ENSMUST00000121865 329 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.46□□□□□ -2.34
Cdx1P18111 Mir465d-201ENSMUST00000196314 58 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm6105-201ENSMUST00000200580 624 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm22302-201ENSMUST00000082657 106 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm24258-201ENSMUST00000083739 133 ntBASIC0.46□□□□□ -2.34
Cdx1P18111 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cdx1P18111 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Cdx1P18111 Mir759-201ENSMUST00000103254 98 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm22080-201ENSMUST00000157591 106 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm23640-201ENSMUST00000157860 104 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm24847-201ENSMUST00000158032 108 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm25375-201ENSMUST00000158157 135 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm25838-201ENSMUST00000158920 120 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
Cdx1P18111 Gm27607-201ENSMUST00000185162 122 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm34015-201ENSMUST00000194908 451 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Mir3535-201ENSMUST00000197651 147 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Cdx1P18111 Gm26495-201ENSMUST00000083152 137 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.45□□□□□ -2.34
Cdx1P18111 Gm22482-201ENSMUST00000122563 359 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm23113-201ENSMUST00000158477 99 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm27997-201ENSMUST00000184942 69 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm38060-201ENSMUST00000194822 464 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm37845-201ENSMUST00000194977 355 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm37404-201ENSMUST00000195726 359 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Mir468-201ENSMUST00000197332 78 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.44□□□□□ -2.34
Cdx1P18111 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm23845-201ENSMUST00000083834 152 ntBASIC0.44□□□□□ -2.34
Cdx1P18111 Gm24375-201ENSMUST00000104397 132 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Mir880-201ENSMUST00000104809 78 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm6985-201ENSMUST00000121255 271 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm23605-201ENSMUST00000157255 127 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm23101-201ENSMUST00000157550 137 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm26236-201ENSMUST00000175536 137 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm37763-201ENSMUST00000193445 120 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm43505-201ENSMUST00000200579 139 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm8219-201ENSMUST00000218309 242 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm25855-201ENSMUST00000082787 72 ntBASIC0.43□□□□□ -2.34
Cdx1P18111 Gm11420-201ENSMUST00000120047 402 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms