Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm24355-201ENSMUST00000082858 122 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Mir1b-201ENSMUST00000117012 122 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Gm38333-201ENSMUST00000193608 604 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.31□□□□□ -2.46
Col1a1P11087 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Mir100-201ENSMUST00000175270 80 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm25121-201ENSMUST00000179846 79 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm17906-201ENSMUST00000202480 901 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.32□□□□□ -2.46
Col1a1P11087 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm23557-201ENSMUST00000157820 138 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm26200-201ENSMUST00000180273 79 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.33□□□□□ -2.46
Col1a1P11087 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
Col1a1P11087 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm22572-201ENSMUST00000082985 105 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.34□□□□□ -2.46
Col1a1P11087 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.35□□□□□ -2.46
Col1a1P11087 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.35□□□□□ -2.46
Col1a1P11087 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.35□□□□□ -2.46
Col1a1P11087 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm25825-201ENSMUST00000157091 124 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm22851-201ENSMUST00000178741 94 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm25074-201ENSMUST00000178782 94 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm28011-201ENSMUST00000184097 175 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 CT025689.4-201ENSMUST00000225926 601 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.35□□□□□ -2.46
Col1a1P11087 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm26173-201ENSMUST00000158416 136 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm26430-201ENSMUST00000178054 107 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 AC156790.3-201ENSMUST00000226200 254 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.35□□□□□ -2.47
Col1a1P11087 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Gm24308-201ENSMUST00000177773 114 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
Col1a1P11087 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 AC164297.3-201ENSMUST00000224238 94 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Mir96-201ENSMUST00000083652 106 ntBASIC-0.36□□□□□ -2.47
Col1a1P11087 Mir450-2-201ENSMUST00000102444 69 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
Col1a1P11087 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Gm18242-201ENSMUST00000218455 542 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-0.37□□□□□ -2.47
Col1a1P11087 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.37□□□□□ -2.47
Col1a1P11087 Mir701-201ENSMUST00000102208 109 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm24340-201ENSMUST00000104208 97 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm22543-201ENSMUST00000104347 94 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms