Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.17□□□□□ -2.44
TcraP01849 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.17□□□□□ -2.44
TcraP01849 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.17□□□□□ -2.44
TcraP01849 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.17□□□□□ -2.44
TcraP01849 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.17□□□□□ -2.44
TcraP01849 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.17□□□□□ -2.44
TcraP01849 Snora20-201ENSMUST00000082703 128 ntBASIC-0.17□□□□□ -2.44
TcraP01849 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
TcraP01849 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.18□□□□□ -2.44
TcraP01849 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.18□□□□□ -2.44
TcraP01849 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.18□□□□□ -2.44
TcraP01849 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.18□□□□□ -2.44
TcraP01849 Mir670-201ENSMUST00000102380 100 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.19□□□□□ -2.44
TcraP01849 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.19□□□□□ -2.44
TcraP01849 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm23492-201ENSMUST00000116837 115 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.2□□□□□ -2.44
TcraP01849 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.21□□□□□ -2.44
TcraP01849 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.21□□□□□ -2.44
TcraP01849 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.21□□□□□ -2.44
TcraP01849 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.21□□□□□ -2.44
TcraP01849 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.21□□□□□ -2.44
TcraP01849 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.21□□□□□ -2.44
TcraP01849 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.21□□□□□ -2.44
TcraP01849 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.21□□□□□ -2.44
TcraP01849 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.22□□□□□ -2.44
TcraP01849 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
TcraP01849 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.23□□□□□ -2.45
TcraP01849 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Snord85-201ENSMUST00000083262 73 ntBASIC-0.23□□□□□ -2.45
TcraP01849 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.24□□□□□ -2.45
TcraP01849 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.24□□□□□ -2.45
TcraP01849 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.24□□□□□ -2.45
TcraP01849 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.25□□□□□ -2.45
TcraP01849 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
TcraP01849 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.25□□□□□ -2.45
TcraP01849 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.25□□□□□ -2.45
TcraP01849 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
TcraP01849 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.25□□□□□ -2.45
TcraP01849 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.25□□□□□ -2.45
TcraP01849 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.25□□□□□ -2.45
TcraP01849 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms