Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm25565-201ENSMUST00000104605 105 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm12771-201ENSMUST00000120246 135 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm15214-201ENSMUST00000122155 470 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm25115-201ENSMUST00000157187 140 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm25658-201ENSMUST00000158472 128 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm20630-201ENSMUST00000177387 551 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm27419-201ENSMUST00000184576 109 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm24966-201ENSMUST00000082443 79 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm22784-201ENSMUST00000104088 132 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Snord19-201ENSMUST00000104609 76 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm22883-201ENSMUST00000157376 106 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm22145-201ENSMUST00000157396 148 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm26363-201ENSMUST00000158866 83 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm24333-201ENSMUST00000175101 84 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm24304-201ENSMUST00000177635 107 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm28992-201ENSMUST00000190534 139 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm21064-202ENSMUST00000190583 278 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm20144-201ENSMUST00000203031 165 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.91□□□□□ -2.26
Col5a1O88207 Gm24204-201ENSMUST00000082950 107 ntBASIC0.91□□□□□ -2.26
Col5a1O88207 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.9□□□□□ -2.26
Col5a1O88207 Gm24283-201ENSMUST00000104233 107 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm24262-201ENSMUST00000157431 144 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm26089-201ENSMUST00000157898 107 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm25333-201ENSMUST00000158035 246 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm23258-201ENSMUST00000158319 106 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm26022-201ENSMUST00000158663 108 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm25024-201ENSMUST00000179667 104 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm22621-201ENSMUST00000179678 74 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm29022-201ENSMUST00000190702 225 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.9□□□□□ -2.27
Col5a1O88207 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Col5a1O88207 Gm25788-201ENSMUST00000082721 131 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.9□□□□□ -2.27
Col5a1O88207 Gm24555-201ENSMUST00000104548 124 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm23492-201ENSMUST00000116837 115 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm6897-201ENSMUST00000117714 138 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm14758-201ENSMUST00000119104 138 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm24440-201ENSMUST00000157236 63 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm26150-201ENSMUST00000157426 151 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm25720-201ENSMUST00000157503 105 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm24512-201ENSMUST00000174963 65 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm24510-201ENSMUST00000174965 94 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm22510-201ENSMUST00000179304 79 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm26336-201ENSMUST00000179449 79 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm26390-201ENSMUST00000179628 79 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm37918-201ENSMUST00000192071 120 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.89□□□□□ -2.27
Col5a1O88207 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm44563-201ENSMUST00000207958 178 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm45508-201ENSMUST00000209298 299 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.89□□□□□ -2.27
Col5a1O88207 Gm25401-201ENSMUST00000082975 106 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm24412-201ENSMUST00000083426 109 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col5a1O88207 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Col5a1O88207 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.89□□□□□ -2.27
Col5a1O88207 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col5a1O88207 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm25783-201ENSMUST00000122525 190 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Mir1951-201ENSMUST00000157981 89 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm25375-201ENSMUST00000158157 135 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm24772-201ENSMUST00000158507 110 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm23571-201ENSMUST00000180073 127 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Gm27585-201ENSMUST00000183717 199 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Col5a1O88207 Gm5010-201ENSMUST00000213131 260 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Snord118-201ENSMUST00000082965 135 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Mir340-201ENSMUST00000083483 98 ntBASIC0.89□□□□□ -2.27
Col5a1O88207 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Col5a1O88207 Gm22935-201ENSMUST00000103960 104 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm25759-201ENSMUST00000103988 129 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Col5a1O88207 Gm25730-201ENSMUST00000178753 165 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm25235-201ENSMUST00000179933 107 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm27803-201ENSMUST00000183763 119 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm27711-201ENSMUST00000183802 118 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm27694-201ENSMUST00000184740 86 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm44352-201ENSMUST00000196358 110 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm42672-201ENSMUST00000197821 352 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm25482-201ENSMUST00000083225 107 ntBASIC0.88□□□□□ -2.27
Col5a1O88207 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Col5a1O88207 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Col5a1O88207 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23584-201ENSMUST00000157655 129 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23219-201ENSMUST00000158123 87 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm22259-201ENSMUST00000178926 107 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm37624-201ENSMUST00000193751 219 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm36189-201ENSMUST00000204113 523 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm45907-201ENSMUST00000213023 193 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Snora19-201ENSMUST00000082962 132 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23658-201ENSMUST00000083233 132 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms