Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.19□□□□□ -2.6
ApobE9Q414 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.19□□□□□ -2.6
ApobE9Q414 Gm22328-201ENSMUST00000158074 112 ntBASIC-1.2□□□□□ -2.6
ApobE9Q414 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.2□□□□□ -2.6
ApobE9Q414 Gm22577-201ENSMUST00000083731 109 ntBASIC-1.2□□□□□ -2.6
ApobE9Q414 Gm25878-201ENSMUST00000104327 93 ntBASIC-1.2□□□□□ -2.6
ApobE9Q414 Gm13725-201ENSMUST00000122139 207 ntBASIC-1.2□□□□□ -2.6
ApobE9Q414 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC-1.2□□□□□ -2.6
ApobE9Q414 Gm22543-201ENSMUST00000104347 94 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm9059-201ENSMUST00000118319 183 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm23584-201ENSMUST00000157655 129 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Mir3112-201ENSMUST00000175431 82 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm45263-201ENSMUST00000210377 1375 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm11798-201ENSMUST00000119150 421 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm24085-201ENSMUST00000175172 116 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm22019-201ENSMUST00000104359 96 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm24481-201ENSMUST00000157210 102 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm20543-201ENSMUST00000174200 726 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm37918-201ENSMUST00000192071 120 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 AC167977.2-201ENSMUST00000225676 682 ntBASIC-1.21□□□□□ -2.6
ApobE9Q414 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm26203-201ENSMUST00000082911 114 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Mir702-201ENSMUST00000102285 109 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm20391-201ENSMUST00000174722 106 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm43955-201ENSMUST00000204332 142 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm10172-201ENSMUST00000085929 558 ntBASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.22□□□□□ -2.6
ApobE9Q414 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm24509-201ENSMUST00000157086 101 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm25358-201ENSMUST00000157189 101 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm23589-201ENSMUST00000157660 105 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Mir340-201ENSMUST00000083483 98 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm25801-201ENSMUST00000082638 106 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm25185-201ENSMUST00000157754 96 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm44325-201ENSMUST00000196757 77 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 AC159246.1-201ENSMUST00000214478 249 ntBASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-1.23□□□□□ -2.61
ApobE9Q414 Gm12044-201ENSMUST00000120335 213 ntBASIC-1.24□□□□□ -2.61
ApobE9Q414 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.24□□□□□ -2.61
ApobE9Q414 Gm23331-201ENSMUST00000157423 108 ntBASIC-1.24□□□□□ -2.61
ApobE9Q414 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.24□□□□□ -2.61
ApobE9Q414 Gm5023-201ENSMUST00000217442 587 ntBASIC-1.24□□□□□ -2.61
ApobE9Q414 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 CT030184.1-201ENSMUST00000222393 416 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm23917-201ENSMUST00000175256 98 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm44300-201ENSMUST00000196792 121 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-1.25□□□□□ -2.61
ApobE9Q414 Mir335-201ENSMUST00000083567 98 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm27428-201ENSMUST00000184289 110 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.25□□□□□ -2.61
ApobE9Q414 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm44337-201ENSMUST00000196553 114 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm9236-201ENSMUST00000196892 587 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm44865-201ENSMUST00000207240 531 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm24623-201ENSMUST00000082616 194 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Snord67-201ENSMUST00000104033 111 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm28299-201ENSMUST00000189908 339 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm22974-201ENSMUST00000083301 103 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Gm24892-201ENSMUST00000122747 104 ntBASIC-1.26□□□□□ -2.61
ApobE9Q414 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Gm45508-201ENSMUST00000209298 299 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Mir155-201ENSMUST00000083463 65 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 AC122341.1-201ENSMUST00000227291 560 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Mir369-201ENSMUST00000083627 79 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Gm25486-201ENSMUST00000158726 63 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC-1.27□□□□□ -2.61
ApobE9Q414 Gm24856-201ENSMUST00000082809 107 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 AL645546.2-201ENSMUST00000224526 265 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Gm24000-201ENSMUST00000158063 89 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 AC102291.2-201ENSMUST00000228083 367 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Mir19a-201ENSMUST00000083482 82 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.28□□□□□ -2.61
ApobE9Q414 Adgrg4-206ENSMUST00000168724 531 ntBASIC-1.28□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms