Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 AC159093.2-201ENSMUST00000227881 297 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22749-201ENSMUST00000082490 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22747-201ENSMUST00000082495 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Snord68-201ENSMUST00000082516 86 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22063-201ENSMUST00000082560 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23057-201ENSMUST00000082801 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26324-201ENSMUST00000083073 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26127-201ENSMUST00000083193 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25577-201ENSMUST00000083414 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24861-201ENSMUST00000083459 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23103-201ENSMUST00000083725 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23732-201ENSMUST00000083751 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22352-201ENSMUST00000083917 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24448-201ENSMUST00000083979 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22886-201ENSMUST00000093714 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26011-201ENSMUST00000104410 104 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25496-201ENSMUST00000104430 120 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22149-201ENSMUST00000104442 136 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm27510-201ENSMUST00000158214 64 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24518-201ENSMUST00000180275 94 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Mir6350-201ENSMUST00000183639 105 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 AC151902.1-201ENSMUST00000227800 375 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.27□□□□□ -2.61
Trav4-3A0A0B4J1K1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
Trav4-3A0A0B4J1K1 Mir7039-201ENSMUST00000183852 85 ntBASIC-1.28□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23039-201ENSMUST00000083870 161 ntBASIC-1.28□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24375-201ENSMUST00000104397 132 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Mir1b-201ENSMUST00000117012 122 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm15077-201ENSMUST00000122344 362 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm22597-201ENSMUST00000157602 80 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm22337-201ENSMUST00000157721 132 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm44352-201ENSMUST00000196358 110 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.29□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25611-201ENSMUST00000104017 133 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm27385-201ENSMUST00000184747 104 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm27624-201ENSMUST00000185047 177 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm44464-201ENSMUST00000198010 138 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.3□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm17054-201ENSMUST00000169811 259 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25241-201ENSMUST00000174909 84 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm26217-201ENSMUST00000175212 84 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm22584-201ENSMUST00000177935 92 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm27942-201ENSMUST00000184669 101 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm28343-201ENSMUST00000185386 112 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm28767-201ENSMUST00000188601 114 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.31□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.32□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm10177-202ENSMUST00000161698 207 ntBASIC-1.32□□□□□ -2.62
Trav4-3A0A0B4J1K1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.32□□□□□ -2.62
Trav4-3A0A0B4J1K1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-1.32□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm24356-201ENSMUST00000082859 106 ntBASIC-1.32□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm26135-201ENSMUST00000101993 72 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm12255-201ENSMUST00000117184 284 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm14491-201ENSMUST00000121919 199 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Snord50b-201ENSMUST00000178497 72 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm28669-201ENSMUST00000188400 100 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm23503-201ENSMUST00000083903 107 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 n-R5s183-201ENSMUST00000083939 115 ntBASIC-1.33□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm14775-201ENSMUST00000122089 310 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm23232-201ENSMUST00000157300 105 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm24618-201ENSMUST00000177718 94 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm23953-201ENSMUST00000178214 94 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm26332-201ENSMUST00000179813 94 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm25121-201ENSMUST00000179846 79 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm22863-201ENSMUST00000180265 94 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm42623-201ENSMUST00000197225 379 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm26379-202ENSMUST00000200225 132 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 AC124346.1-201ENSMUST00000218539 364 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 AC120553.1-201ENSMUST00000227313 260 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Gm23516-201ENSMUST00000093728 107 ntBASIC-1.34□□□□□ -2.62
Trav4-3A0A0B4J1K1 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm13560-201ENSMUST00000121865 329 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24559-201ENSMUST00000157519 121 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23857-201ENSMUST00000158379 111 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Mir195b-201ENSMUST00000184814 97 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-1.35□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 201.8 ms