Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm22233-201ENSMUST00000157464 114 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Mir1951-201ENSMUST00000157981 89 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm25868-201ENSMUST00000158253 114 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm22425-201ENSMUST00000158532 138 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm24221-201ENSMUST00000158833 313 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm23474-201ENSMUST00000158884 75 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm27640-201ENSMUST00000184580 147 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm28344-201ENSMUST00000185704 279 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Mir3535-201ENSMUST00000197651 147 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm43884-201ENSMUST00000204251 559 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm30155-201ENSMUST00000223458 339 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm26111-201ENSMUST00000083969 106 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Mir490-201ENSMUST00000093567 84 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm24275-201ENSMUST00000116780 146 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm16032-201ENSMUST00000118534 168 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm24440-201ENSMUST00000157236 63 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm23106-201ENSMUST00000157554 101 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm24737-201ENSMUST00000158861 100 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm24512-201ENSMUST00000174963 65 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm25750-201ENSMUST00000175483 112 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm6105-201ENSMUST00000200580 624 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm29818-201ENSMUST00000218070 165 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm22248-201ENSMUST00000082482 150 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm26224-201ENSMUST00000082506 80 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm22884-201ENSMUST00000083127 140 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm25627-201ENSMUST00000084003 153 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm24164-201ENSMUST00000093663 104 ntBASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Lmx1aQ9JKU8 Gm23996-201ENSMUST00000158062 131 ntBASIC0.7□□□□□ -2.3
Lmx1aQ9JKU8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.7□□□□□ -2.3
Lmx1aQ9JKU8 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.7□□□□□ -2.3
Lmx1aQ9JKU8 Gm25204-201ENSMUST00000082843 106 ntBASIC0.7□□□□□ -2.3
Lmx1aQ9JKU8 Gm24629-201ENSMUST00000122762 89 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm25663-201ENSMUST00000157698 135 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm24847-201ENSMUST00000158032 108 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Mir1931-201ENSMUST00000158589 119 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm37313-201ENSMUST00000191673 290 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm44419-201ENSMUST00000203338 229 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm9795-201ENSMUST00000062156 693 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm23299-201ENSMUST00000082708 79 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm24042-201ENSMUST00000083114 103 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm23845-201ENSMUST00000083834 152 ntBASIC0.69□□□□□ -2.3
Lmx1aQ9JKU8 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm23665-201ENSMUST00000158054 62 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm27420-201ENSMUST00000183823 79 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm28921-201ENSMUST00000190219 378 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm29022-201ENSMUST00000190702 225 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm34015-201ENSMUST00000194908 451 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm25697-201ENSMUST00000082902 98 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Lmx1aQ9JKU8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm11420-201ENSMUST00000120047 402 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm11792-201ENSMUST00000120640 168 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm14846-201ENSMUST00000121868 216 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm22080-201ENSMUST00000157591 106 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm44352-201ENSMUST00000196358 110 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm22704-201ENSMUST00000083027 137 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm26495-201ENSMUST00000083152 137 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm23039-201ENSMUST00000083870 161 ntBASIC0.67□□□□□ -2.3
Lmx1aQ9JKU8 Gm11856-201ENSMUST00000118712 276 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm22814-201ENSMUST00000157452 104 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm22888-201ENSMUST00000158640 77 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm27974-201ENSMUST00000183415 105 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm27997-201ENSMUST00000184942 69 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm28849-201ENSMUST00000188127 174 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm28925-201ENSMUST00000188586 168 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm29014-201ENSMUST00000191422 326 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Gm25793-201ENSMUST00000083287 107 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.66□□□□□ -2.3
Lmx1aQ9JKU8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm15002-201ENSMUST00000118406 452 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm14761-201ENSMUST00000121363 262 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm24595-201ENSMUST00000122501 110 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms