Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Mir3083-201ENSMUST00000175377 64 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm20672-201ENSMUST00000176605 261 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm27878-201ENSMUST00000184000 106 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm24038-201ENSMUST00000082872 159 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm23507-201ENSMUST00000083078 107 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Mir673-201ENSMUST00000102361 91 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm25289-201ENSMUST00000122799 119 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm14947-201ENSMUST00000133704 303 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm23168-201ENSMUST00000157156 143 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm22228-201ENSMUST00000157364 101 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Mir6928-201ENSMUST00000185166 70 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm29658-201ENSMUST00000185404 230 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm28647-201ENSMUST00000188416 197 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm43521-201ENSMUST00000197838 255 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm43107-201ENSMUST00000198729 255 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm25851-201ENSMUST00000082794 107 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.78□□□□□ -1.96
Trim39Q9ESN2 Gm23470-201ENSMUST00000157129 120 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm23390-201ENSMUST00000157393 106 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm26345-201ENSMUST00000157534 120 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm24730-201ENSMUST00000158228 117 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Mir1931-201ENSMUST00000158589 119 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm25470-201ENSMUST00000175576 111 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trim39Q9ESN2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm24250-201ENSMUST00000157320 135 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm23898-201ENSMUST00000158111 103 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm23770-201ENSMUST00000178009 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm22832-201ENSMUST00000178022 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm23863-201ENSMUST00000178265 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm24828-201ENSMUST00000178507 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm23052-201ENSMUST00000178633 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm25729-201ENSMUST00000179050 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm25359-201ENSMUST00000179315 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm22624-201ENSMUST00000179913 108 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm27379-201ENSMUST00000183730 123 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm25697-201ENSMUST00000082902 98 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim39Q9ESN2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm22792-201ENSMUST00000157225 133 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm25224-201ENSMUST00000158195 68 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm23380-201ENSMUST00000158448 103 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm16111-201ENSMUST00000162128 285 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Snord50a-201ENSMUST00000178154 72 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm24463-201ENSMUST00000178417 72 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm27783-201ENSMUST00000183534 105 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm42960-201ENSMUST00000202160 241 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm43932-201ENSMUST00000204499 52 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm18346-201ENSMUST00000216782 325 ntBASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Trim39Q9ESN2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Gm26297-201ENSMUST00000179464 132 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Mir3961-201ENSMUST00000198795 59 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Mir301-201ENSMUST00000083655 86 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trim39Q9ESN2 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Gm22729-201ENSMUST00000158088 129 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Gm22943-201ENSMUST00000158564 76 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Mir6377-201ENSMUST00000183760 114 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Mir7215-201ENSMUST00000200383 51 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim39Q9ESN2 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms