Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm25884-201ENSMUST00000157782 62 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm22961-201ENSMUST00000157964 106 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm23854-201ENSMUST00000158378 108 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm28669-201ENSMUST00000188400 100 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm43602-201ENSMUST00000196772 300 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm24038-201ENSMUST00000082872 159 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm25627-201ENSMUST00000084003 153 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm24916-201ENSMUST00000157287 79 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm25558-201ENSMUST00000158083 106 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Snord93-201ENSMUST00000175580 71 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm6109-201ENSMUST00000223297 348 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm23249-201ENSMUST00000083369 161 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.53□□□□□ -2
Nkx6-1Q99MA9 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm15536-201ENSMUST00000121411 114 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm22790-201ENSMUST00000157229 129 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm25996-201ENSMUST00000175393 117 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm27668-201ENSMUST00000184188 120 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm29658-201ENSMUST00000185404 230 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm44464-201ENSMUST00000198010 138 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Mir34a-201ENSMUST00000083559 102 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.52□□□□□ -2.01
Nkx6-1Q99MA9 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm24049-201ENSMUST00000102409 100 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm26091-201ENSMUST00000122704 82 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm25364-201ENSMUST00000158851 107 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Gm23095-201ENSMUST00000083446 107 ntBASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx6-1Q99MA9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Gm15281-201ENSMUST00000125181 351 ntBASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Gm22768-201ENSMUST00000158366 153 ntBASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Gm27792-201ENSMUST00000184031 115 ntBASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Gm25987-201ENSMUST00000083234 107 ntBASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx6-1Q99MA9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm22003-201ENSMUST00000101885 107 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm23803-201ENSMUST00000104610 132 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm14709-201ENSMUST00000121225 304 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm23434-201ENSMUST00000157179 100 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm22756-201ENSMUST00000180118 107 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm27369-201ENSMUST00000185182 71 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm26054-201ENSMUST00000083037 107 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm25409-201ENSMUST00000083764 131 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm24492-201ENSMUST00000083798 107 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.49□□□□□ -2.01
Nkx6-1Q99MA9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Gm44489-201ENSMUST00000104619 97 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Gm14671-201ENSMUST00000121790 262 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Mir429-201ENSMUST00000083493 83 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Snora33-201ENSMUST00000093556 129 ntBASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx6-1Q99MA9 Gm25878-201ENSMUST00000104327 93 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 Gm23859-201ENSMUST00000158383 64 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 Gm19855-201ENSMUST00000210145 249 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 Gm23377-201ENSMUST00000082943 126 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 Gm24030-201ENSMUST00000083931 164 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.47□□□□□ -2.01
Nkx6-1Q99MA9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Gm25623-201ENSMUST00000157216 108 ntBASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Gm23898-201ENSMUST00000158111 103 ntBASIC2.46□□□□□ -2.02
Nkx6-1Q99MA9 Gm25771-201ENSMUST00000158565 144 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms