Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC-0.02□□□□□ -2.41
Lsm1Q8VC85 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.02□□□□□ -2.41
Lsm1Q8VC85 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.02□□□□□ -2.41
Lsm1Q8VC85 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.02□□□□□ -2.41
Lsm1Q8VC85 Gm16186-201ENSMUST00000120132 216 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.03□□□□□ -2.41
Lsm1Q8VC85 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Lsm1Q8VC85 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm45616-201ENSMUST00000211711 319 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.05□□□□□ -2.42
Lsm1Q8VC85 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 AC126554.1-201ENSMUST00000222161 271 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.06□□□□□ -2.42
Lsm1Q8VC85 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
Lsm1Q8VC85 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.08□□□□□ -2.42
Lsm1Q8VC85 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Lsm1Q8VC85 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Snord82-201ENSMUST00000082889 70 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Mir411-201ENSMUST00000083543 82 ntBASIC-0.1□□□□□ -2.43
Lsm1Q8VC85 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 AC192616.1-201ENSMUST00000221922 132 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.11□□□□□ -2.43
Lsm1Q8VC85 Snord69-201ENSMUST00000104024 80 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms