Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Gm25267-201ENSMUST00000158522 63 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Gm25364-201ENSMUST00000158851 107 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Mir7657-201ENSMUST00000196051 57 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Gm22509-201ENSMUST00000082775 107 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Gm24929-201ENSMUST00000083403 139 ntBASIC2.41□□□□□ -2.02
Ccdc9Q8VC31 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ccdc9Q8VC31 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.4□□□□□ -2.02
Ccdc9Q8VC31 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.4□□□□□ -2.02
Ccdc9Q8VC31 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ccdc9Q8VC31 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.4□□□□□ -2.02
Ccdc9Q8VC31 Gm25485-201ENSMUST00000104120 132 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Snord90-201ENSMUST00000104568 111 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Gm15536-201ENSMUST00000121411 114 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Mir669j-201ENSMUST00000179023 121 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Mir3969-201ENSMUST00000197106 92 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Gm25820-202ENSMUST00000197479 128 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Gm22978-201ENSMUST00000082607 160 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Gm25142-201ENSMUST00000082698 107 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Gm24461-201ENSMUST00000082735 103 ntBASIC2.4□□□□□ -2.03
Ccdc9Q8VC31 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm26342-201ENSMUST00000104557 129 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Mir873a-201ENSMUST00000104863 77 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm23655-201ENSMUST00000122627 105 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm22553-201ENSMUST00000157797 295 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm25444-201ENSMUST00000158999 113 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Mir6399-201ENSMUST00000184050 84 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm37778-201ENSMUST00000191732 190 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Gm24412-201ENSMUST00000083426 109 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Mir107-201ENSMUST00000083660 87 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc9Q8VC31 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm26249-201ENSMUST00000116708 118 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm24274-201ENSMUST00000116787 124 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm23551-201ENSMUST00000116852 121 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm11786-201ENSMUST00000120799 155 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm6025-201ENSMUST00000121517 201 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm24892-201ENSMUST00000122747 104 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm22429-201ENSMUST00000158553 130 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm25488-201ENSMUST00000158728 118 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm23342-201ENSMUST00000158958 115 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm26864-201ENSMUST00000181346 156 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm27544-201ENSMUST00000185069 155 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm29613-201ENSMUST00000185846 313 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm29544-201ENSMUST00000188860 313 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm28808-201ENSMUST00000190978 313 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm43676-201ENSMUST00000197532 540 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Snord43-201ENSMUST00000199549 108 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm44024-201ENSMUST00000203008 476 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm44932-201ENSMUST00000206799 121 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm22248-201ENSMUST00000082482 150 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Gm22443-201ENSMUST00000082890 107 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Snora33-201ENSMUST00000093556 129 ntBASIC2.38□□□□□ -2.03
Ccdc9Q8VC31 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm26011-201ENSMUST00000104410 104 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm15861-201ENSMUST00000120979 339 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm22227-201ENSMUST00000157356 259 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm23817-201ENSMUST00000158449 104 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm22943-201ENSMUST00000158564 76 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm24656-201ENSMUST00000177548 132 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Mir6370-201ENSMUST00000183510 120 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm27369-201ENSMUST00000185182 71 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Mir378a-201ENSMUST00000198300 66 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm25684-201ENSMUST00000083941 107 ntBASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ccdc9Q8VC31 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Mir669d-201ENSMUST00000104644 121 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm23230-201ENSMUST00000157298 133 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm23101-201ENSMUST00000157550 137 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm22665-201ENSMUST00000158720 275 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm7592-201ENSMUST00000160674 627 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Mir7009-201ENSMUST00000184519 64 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Mir151-201ENSMUST00000083678 68 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.36□□□□□ -2.03
Ccdc9Q8VC31 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm25060-201ENSMUST00000157374 130 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm24222-201ENSMUST00000158834 93 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm25994-201ENSMUST00000175392 101 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm22264-201ENSMUST00000178200 107 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm7258-201ENSMUST00000179317 300 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm27399-201ENSMUST00000184250 78 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm42834-201ENSMUST00000196845 256 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 Gm43898-201ENSMUST00000204456 424 ntBASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc9Q8VC31 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms