Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm23307-201ENSMUST00000179167 105 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm25286-201ENSMUST00000179790 105 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm23148-201ENSMUST00000180367 107 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm43884-201ENSMUST00000204251 559 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm25204-201ENSMUST00000082843 106 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm25258-201ENSMUST00000083049 107 ntBASIC0.47□□□□□ -2.33
Chrna3Q8R4G9 Gm24116-201ENSMUST00000103975 107 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Gm14574-201ENSMUST00000120644 279 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Gm22945-201ENSMUST00000158557 157 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Mir1931-201ENSMUST00000158589 119 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Gm44465-201ENSMUST00000199536 114 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.46□□□□□ -2.34
Chrna3Q8R4G9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm22883-201ENSMUST00000157376 106 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm23851-201ENSMUST00000083831 103 ntBASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Chrna3Q8R4G9 Gm12785-201ENSMUST00000122052 172 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Gm25968-201ENSMUST00000157167 100 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Gm26400-201ENSMUST00000175012 85 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Gm44387-201ENSMUST00000196298 145 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Gm42622-201ENSMUST00000197229 355 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.44□□□□□ -2.34
Chrna3Q8R4G9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm14761-201ENSMUST00000121363 262 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm24595-201ENSMUST00000122501 110 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm25450-201ENSMUST00000179144 107 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm25929-201ENSMUST00000082784 107 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm25855-201ENSMUST00000082787 72 ntBASIC0.43□□□□□ -2.34
Chrna3Q8R4G9 Gm15002-201ENSMUST00000118406 452 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm13711-201ENSMUST00000119708 453 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm13560-201ENSMUST00000121865 329 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm23474-201ENSMUST00000158884 75 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm7654-201ENSMUST00000186738 683 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm36946-201ENSMUST00000192706 435 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm37997-201ENSMUST00000193515 267 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm42988-201ENSMUST00000198116 225 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm43472-201ENSMUST00000200175 154 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm44948-201ENSMUST00000209050 149 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.42□□□□□ -2.34
Chrna3Q8R4G9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm23492-201ENSMUST00000116837 115 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm23113-201ENSMUST00000158477 99 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm28256-201ENSMUST00000188953 139 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm28559-201ENSMUST00000190532 139 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm44352-201ENSMUST00000196358 110 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm6105-201ENSMUST00000200580 624 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm22248-201ENSMUST00000082482 150 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Rny3-201ENSMUST00000083011 102 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm23039-201ENSMUST00000083870 161 ntBASIC0.41□□□□□ -2.34
Chrna3Q8R4G9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm22598-201ENSMUST00000157600 127 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm24498-201ENSMUST00000158445 102 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm28489-201ENSMUST00000186655 316 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm43238-201ENSMUST00000196463 359 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm44063-201ENSMUST00000203307 376 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Gm44149-201ENSMUST00000204256 226 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.4□□□□□ -2.35
Chrna3Q8R4G9 Mir709-201ENSMUST00000102190 88 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm42606-201ENSMUST00000114209 239 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm25970-201ENSMUST00000157165 86 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm24847-201ENSMUST00000158032 108 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm26401-201ENSMUST00000158502 76 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm23194-201ENSMUST00000158813 105 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm22114-201ENSMUST00000177756 107 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm43976-201ENSMUST00000203637 235 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm44687-201ENSMUST00000204975 235 ntBASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Chrna3Q8R4G9 Gm24375-201ENSMUST00000104397 132 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm11834-201ENSMUST00000122257 585 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm24629-201ENSMUST00000122762 89 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm25827-201ENSMUST00000157089 107 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms