Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm22159-201ENSMUST00000158412 130 ntBASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm28912-201ENSMUST00000189001 234 ntBASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm44491-201ENSMUST00000196794 96 ntBASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm25513-201ENSMUST00000083861 162 ntBASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Gm14536-201ENSMUST00000118324 138 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Gm15027-201ENSMUST00000120922 138 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Gm37693-201ENSMUST00000194562 234 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ushbp1Q8R370 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
Ushbp1Q8R370 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Ushbp1Q8R370 Gm22139-201ENSMUST00000158747 105 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Mir1966-201ENSMUST00000158807 108 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gm21064-202ENSMUST00000190583 278 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gm37579-201ENSMUST00000194291 142 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gm25796-201ENSMUST00000082645 163 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gm22686-201ENSMUST00000082847 100 ntBASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ushbp1Q8R370 Mir293-201ENSMUST00000104841 80 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm22768-201ENSMUST00000158366 153 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Mir3086-201ENSMUST00000175072 87 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm24333-201ENSMUST00000175101 84 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm29308-201ENSMUST00000188863 315 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm28537-201ENSMUST00000189026 315 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm29631-201ENSMUST00000191065 315 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Mir3087-201ENSMUST00000199405 56 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm35736-201ENSMUST00000203681 313 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ushbp1Q8R370 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm24263-201ENSMUST00000104059 107 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Mir1298-201ENSMUST00000116681 98 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm24379-201ENSMUST00000122695 86 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm23718-201ENSMUST00000157350 307 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm23665-201ENSMUST00000158054 62 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm24676-201ENSMUST00000158758 75 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm23966-201ENSMUST00000179823 107 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm44326-201ENSMUST00000198226 101 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Mir155-201ENSMUST00000083463 65 ntBASIC2.38□□□□□ -2.03
Ushbp1Q8R370 Gm42623-201ENSMUST00000197225 379 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 Gm42988-201ENSMUST00000198116 225 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 Snord43-201ENSMUST00000199549 108 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 Gm45654-201ENSMUST00000210980 123 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ushbp1Q8R370 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.37□□□□□ -2.03
Ushbp1Q8R370 Gm25836-201ENSMUST00000158918 123 ntBASIC2.36□□□□□ -2.03
Ushbp1Q8R370 Gm26160-201ENSMUST00000158965 63 ntBASIC2.36□□□□□ -2.03
Ushbp1Q8R370 Mir7217-201ENSMUST00000200304 62 ntBASIC2.36□□□□□ -2.03
Ushbp1Q8R370 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.36□□□□□ -2.03
Ushbp1Q8R370 Snora69-201ENSMUST00000083708 131 ntBASIC2.36□□□□□ -2.03
Ushbp1Q8R370 Gm25825-201ENSMUST00000157091 124 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Gm24010-201ENSMUST00000157731 282 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Gm24167-201ENSMUST00000177733 124 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Gm24028-201ENSMUST00000178991 124 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Gm27851-201ENSMUST00000183529 63 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Mir488-201ENSMUST00000093595 109 ntBASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ushbp1Q8R370 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm23390-201ENSMUST00000157393 106 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm24237-201ENSMUST00000157790 132 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm23043-201ENSMUST00000157890 109 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm22381-201ENSMUST00000158186 107 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm22384-201ENSMUST00000158187 104 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm23854-201ENSMUST00000158378 108 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm24054-201ENSMUST00000158619 105 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm25368-201ENSMUST00000158847 131 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm26291-201ENSMUST00000158889 137 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm23714-201ENSMUST00000179259 105 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm26454-201ENSMUST00000082682 107 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm22723-201ENSMUST00000083820 129 ntBASIC2.34□□□□□ -2.03
Ushbp1Q8R370 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm26049-201ENSMUST00000157313 108 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm24851-201ENSMUST00000158028 103 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm25920-201ENSMUST00000158307 99 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm24634-201ENSMUST00000158672 107 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 170.3 ms