Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.31□□□□□ -2.46
Col6a6Q8C6K9 Gm25915-201ENSMUST00000104265 126 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm23557-201ENSMUST00000157820 138 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.32□□□□□ -2.46
Col6a6Q8C6K9 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Mir327-201ENSMUST00000199328 69 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Mir717-201ENSMUST00000102259 109 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm25563-201ENSMUST00000104603 74 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm23725-201ENSMUST00000177876 107 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.33□□□□□ -2.46
Col6a6Q8C6K9 Gm22831-201ENSMUST00000102473 109 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Mir1b-201ENSMUST00000117012 122 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm10780-201ENSMUST00000099459 285 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm25475-201ENSMUST00000082825 180 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.34□□□□□ -2.46
Col6a6Q8C6K9 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm26143-201ENSMUST00000104480 108 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Mir100-201ENSMUST00000175270 80 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm24518-201ENSMUST00000180275 94 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm29848-201ENSMUST00000203107 295 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 AC100209.2-201ENSMUST00000224461 451 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm22508-201ENSMUST00000082772 110 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Mir377-201ENSMUST00000083504 68 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm10193-201ENSMUST00000188288 231 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Snord68-201ENSMUST00000082516 86 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Snora62-201ENSMUST00000082991 149 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.35□□□□□ -2.47
Col6a6Q8C6K9 Mir547-201ENSMUST00000102051 78 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm12105-201ENSMUST00000120846 779 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm25451-201ENSMUST00000177832 121 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.36□□□□□ -2.47
Col6a6Q8C6K9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.37□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms