Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23588-201ENSMUST00000157659 99 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm23761-201ENSMUST00000158347 104 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm23380-201ENSMUST00000158448 103 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm26214-201ENSMUST00000158581 107 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Mir3106-201ENSMUST00000175401 82 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 AC132833.2-201ENSMUST00000228699 157 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm25090-201ENSMUST00000104000 132 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm24126-201ENSMUST00000104111 106 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm12213-201ENSMUST00000119924 353 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm24649-201ENSMUST00000157106 134 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm22706-201ENSMUST00000157907 112 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm25373-201ENSMUST00000158156 115 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm25976-201ENSMUST00000158695 130 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Gm44223-201ENSMUST00000204854 114 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim47Q8C0E3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm22939-201ENSMUST00000103958 131 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm22270-201ENSMUST00000104034 132 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm14671-201ENSMUST00000121790 262 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm25558-201ENSMUST00000158083 106 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Mir3092-201ENSMUST00000174954 96 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm24573-201ENSMUST00000175499 112 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Mir6402-201ENSMUST00000183406 80 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm44476-201ENSMUST00000196225 91 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm43901-201ENSMUST00000203247 453 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 AC140930.2-201ENSMUST00000221803 109 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm22249-201ENSMUST00000082485 136 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim47Q8C0E3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim47Q8C0E3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Gm25680-201ENSMUST00000116917 126 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Gm22635-201ENSMUST00000116962 126 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Gm14882-201ENSMUST00000117216 218 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Gm23986-201ENSMUST00000157144 63 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Gm27582-201ENSMUST00000184084 126 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Mir7118-201ENSMUST00000197760 61 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.34□□□□□ -1.87
Trim47Q8C0E3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Trim47Q8C0E3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Trim47Q8C0E3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trim47Q8C0E3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm26077-201ENSMUST00000104064 123 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm24250-201ENSMUST00000157320 135 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm24787-201ENSMUST00000157380 123 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm23826-201ENSMUST00000157394 119 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm23770-201ENSMUST00000178009 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm22832-201ENSMUST00000178022 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm23863-201ENSMUST00000178265 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm24828-201ENSMUST00000178507 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm23052-201ENSMUST00000178633 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm25729-201ENSMUST00000179050 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm25359-201ENSMUST00000179315 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Gm22624-201ENSMUST00000179913 108 ntBASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Trim47Q8C0E3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Gm22387-201ENSMUST00000158191 131 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Mir5619-201ENSMUST00000176065 61 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Gm44482-201ENSMUST00000199232 103 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trim47Q8C0E3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Mir1195-201ENSMUST00000116818 98 ntBASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC3.31□□□□□ -1.88
Trim47Q8C0E3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Trim47Q8C0E3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Mir878-201ENSMUST00000104680 78 ntBASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Gm23381-201ENSMUST00000157676 94 ntBASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Gm24674-201ENSMUST00000179194 104 ntBASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.3□□□□□ -1.88
Trim47Q8C0E3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Gm14937-201ENSMUST00000119709 208 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Gm26099-201ENSMUST00000157248 109 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Gm22332-201ENSMUST00000158072 126 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Gm44966-201ENSMUST00000208096 157 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 199.9 ms