Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm26375-201ENSMUST00000101829 106 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm22939-201ENSMUST00000103958 131 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm25168-201ENSMUST00000104189 132 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm23656-201ENSMUST00000122626 112 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm23390-201ENSMUST00000157393 106 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm24686-201ENSMUST00000157755 93 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Gm22135-201ENSMUST00000158752 108 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Mir301-201ENSMUST00000083655 86 ntBASIC4.04□□□□□ -1.76
Trim35Q8C006 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim35Q8C006 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Trim35Q8C006 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim35Q8C006 Mir551b-201ENSMUST00000102165 98 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm26036-201ENSMUST00000158149 144 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm23375-201ENSMUST00000175407 83 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Mir6996-201ENSMUST00000183922 61 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm37579-201ENSMUST00000194291 142 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm43730-201ENSMUST00000199863 372 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Mir126a-201ENSMUST00000083606 73 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm43753-201ENSMUST00000196539 3309 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.03□□□□□ -1.76
Trim35Q8C006 Gm22269-201ENSMUST00000104002 130 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm22204-201ENSMUST00000122654 327 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm26029-201ENSMUST00000158659 132 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm24223-201ENSMUST00000158827 90 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim35Q8C006 Mir6369-201ENSMUST00000183772 106 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm43927-201ENSMUST00000204599 117 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm26449-201ENSMUST00000082452 104 ntBASIC4.02□□□□□ -1.77
Trim35Q8C006 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim35Q8C006 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Trim35Q8C006 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim35Q8C006 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim35Q8C006 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim35Q8C006 Gm43268-201ENSMUST00000201536 4055 ntBASIC4.01□□□□□ -1.77
Trim35Q8C006 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim35Q8C006 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim35Q8C006 Gm25991-201ENSMUST00000102439 99 ntBASIC4.01□□□□□ -1.77
Trim35Q8C006 Gm26165-201ENSMUST00000083791 138 ntBASIC4.01□□□□□ -1.77
Trim35Q8C006 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim35Q8C006 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim35Q8C006 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim35Q8C006 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Trim35Q8C006 Mir669a-3-201ENSMUST00000102074 109 ntBASIC4□□□□□ -1.77
Trim35Q8C006 Gm25104-201ENSMUST00000122476 163 ntBASIC4□□□□□ -1.77
Trim35Q8C006 Gm23983-201ENSMUST00000157142 114 ntBASIC4□□□□□ -1.77
Trim35Q8C006 Gm26219-201ENSMUST00000175216 71 ntBASIC4□□□□□ -1.77
Trim35Q8C006 Gm46998-201ENSMUST00000221444 330 ntBASIC4□□□□□ -1.77
Trim35Q8C006 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC4□□□□□ -1.77
Trim35Q8C006 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim35Q8C006 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4□□□□□ -1.77
Trim35Q8C006 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Trim35Q8C006 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim35Q8C006 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm23961-201ENSMUST00000104685 97 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm25011-201ENSMUST00000158398 126 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm24503-201ENSMUST00000158454 135 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm26004-201ENSMUST00000158804 116 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm20118-201ENSMUST00000187207 162 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Mir34b-201ENSMUST00000083558 84 ntBASIC3.99□□□□□ -1.77
Trim35Q8C006 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim35Q8C006 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim35Q8C006 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim35Q8C006 Gm22816-201ENSMUST00000157450 117 ntBASIC3.98□□□□□ -1.77
Trim35Q8C006 Gm24850-201ENSMUST00000158029 119 ntBASIC3.98□□□□□ -1.77
Trim35Q8C006 Gm45522-201ENSMUST00000210784 166 ntBASIC3.98□□□□□ -1.77
Trim35Q8C006 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim35Q8C006 Gm22731-201ENSMUST00000158086 94 ntBASIC3.97□□□□□ -1.77
Trim35Q8C006 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Trim35Q8C006 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim35Q8C006 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim35Q8C006 Gm18795-202ENSMUST00000223373 2920 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim35Q8C006 Gm22338-201ENSMUST00000157715 129 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 Gm27698-201ENSMUST00000184060 249 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 Gm25038-201ENSMUST00000082928 130 ntBASIC3.96□□□□□ -1.78
Trim35Q8C006 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim35Q8C006 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim35Q8C006 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim35Q8C006 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim35Q8C006 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim35Q8C006 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Mir6938-201ENSMUST00000184173 63 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Mir6345-201ENSMUST00000184286 128 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Gm30534-201ENSMUST00000217928 207 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Gm24134-201ENSMUST00000083361 71 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim35Q8C006 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Trim35Q8C006 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.95□□□□□ -1.78
Trim35Q8C006 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim35Q8C006 Mir741-201ENSMUST00000103931 71 ntBASIC3.94□□□□□ -1.78
Trim35Q8C006 n-R5s188-201ENSMUST00000122646 105 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms