Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm26392-201ENSMUST00000179661 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25230-201ENSMUST00000179740 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm26434-201ENSMUST00000179778 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25741-201ENSMUST00000179825 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24759-201ENSMUST00000179827 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24219-201ENSMUST00000179861 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm27698-201ENSMUST00000184060 249 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm27668-201ENSMUST00000184188 120 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23254-201ENSMUST00000097244 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Mir374b-201ENSMUST00000102314 95 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm26341-201ENSMUST00000104561 134 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Mir669d-201ENSMUST00000104644 121 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm25825-201ENSMUST00000157091 124 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm25623-201ENSMUST00000157216 108 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm25393-201ENSMUST00000157336 285 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm22212-201ENSMUST00000158096 106 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm20438-201ENSMUST00000174441 329 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm24813-201ENSMUST00000175310 84 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm44358-201ENSMUST00000196301 98 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm44482-201ENSMUST00000199232 103 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm45456-201ENSMUST00000210841 243 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Gm8219-201ENSMUST00000218309 242 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Shkbp1Q6P7W2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm22486-201ENSMUST00000116815 137 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm2830-201ENSMUST00000140330 385 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm23381-201ENSMUST00000157676 94 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm23043-201ENSMUST00000157890 109 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm24390-201ENSMUST00000179578 62 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm25820-202ENSMUST00000197479 128 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm44666-201ENSMUST00000208544 391 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Gm25513-201ENSMUST00000083861 162 ntBASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Shkbp1Q6P7W2 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Mir450b-201ENSMUST00000102095 82 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm24126-201ENSMUST00000104111 106 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm24911-201ENSMUST00000157292 136 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm22845-201ENSMUST00000157712 104 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm22264-201ENSMUST00000178200 107 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Mir6350-201ENSMUST00000183639 105 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Mir7039-201ENSMUST00000183852 85 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm44921-201ENSMUST00000205290 301 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm45288-201ENSMUST00000210236 151 ntBASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Shkbp1Q6P7W2 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm14567-201ENSMUST00000117155 174 ntBASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm23588-201ENSMUST00000157659 99 ntBASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm27672-201ENSMUST00000183751 204 ntBASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm25124-201ENSMUST00000083345 164 ntBASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.42□□□□□ -2.02
Shkbp1Q6P7W2 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm22004-201ENSMUST00000101884 107 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm26473-201ENSMUST00000116763 127 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm14502-201ENSMUST00000118154 113 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm24598-201ENSMUST00000122510 74 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm22558-201ENSMUST00000157326 95 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Snord11-201ENSMUST00000158468 84 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Mir1927-201ENSMUST00000158579 109 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm24837-201ENSMUST00000158683 81 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Mir7226-201ENSMUST00000184953 60 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm44320-201ENSMUST00000199276 86 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Gm44057-201ENSMUST00000204547 96 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.41□□□□□ -2.02
Shkbp1Q6P7W2 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Shkbp1Q6P7W2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm22490-201ENSMUST00000157188 119 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm22790-201ENSMUST00000157229 129 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm23223-201ENSMUST00000158119 127 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm24842-201ENSMUST00000158681 54 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm23548-201ENSMUST00000158963 106 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm22708-201ENSMUST00000158987 103 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Mir322-201ENSMUST00000083484 95 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Mir369-201ENSMUST00000083627 79 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Shkbp1Q6P7W2 Gm25491-201ENSMUST00000158733 308 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Gm5224-201ENSMUST00000183060 350 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 203.2 ms