Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.38□□□□□ -2.19
Sdc3Q64519 Gm22421-201ENSMUST00000083058 107 ntBASIC1.38□□□□□ -2.19
Sdc3Q64519 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.38□□□□□ -2.19
Sdc3Q64519 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm23705-201ENSMUST00000104370 130 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm26156-201ENSMUST00000116999 123 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm26049-201ENSMUST00000157313 108 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm26482-201ENSMUST00000158015 62 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Mir6375-201ENSMUST00000197176 95 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.37□□□□□ -2.19
Sdc3Q64519 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Gm23423-201ENSMUST00000082782 106 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.37□□□□□ -2.19
Sdc3Q64519 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Sdc3Q64519 Mir544-201ENSMUST00000103813 78 ntBASIC1.36□□□□□ -2.19
Sdc3Q64519 Gm23766-201ENSMUST00000103894 80 ntBASIC1.36□□□□□ -2.19
Sdc3Q64519 Gm25315-201ENSMUST00000116823 121 ntBASIC1.36□□□□□ -2.19
Sdc3Q64519 Gm26038-201ENSMUST00000158151 106 ntBASIC1.36□□□□□ -2.19
Sdc3Q64519 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.35□□□□□ -2.19
Sdc3Q64519 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.35□□□□□ -2.19
Sdc3Q64519 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc3Q64519 Gm23221-201ENSMUST00000158118 93 ntBASIC1.35□□□□□ -2.19
Sdc3Q64519 Gm23194-201ENSMUST00000158813 105 ntBASIC1.35□□□□□ -2.19
Sdc3Q64519 Snora15-201ENSMUST00000177461 131 ntBASIC1.35□□□□□ -2.19
Sdc3Q64519 Mir7675-201ENSMUST00000184262 58 ntBASIC1.35□□□□□ -2.19
Sdc3Q64519 Gm23907-201ENSMUST00000104595 189 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm24835-201ENSMUST00000116777 111 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm23841-201ENSMUST00000116951 114 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm13801-201ENSMUST00000120750 160 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm23466-201ENSMUST00000157133 106 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm25424-201ENSMUST00000157612 58 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm27326-201ENSMUST00000183504 95 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm34139-201ENSMUST00000196166 294 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm44483-201ENSMUST00000197203 97 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm45116-201ENSMUST00000207392 275 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.34□□□□□ -2.19
Sdc3Q64519 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.34□□□□□ -2.19
Sdc3Q64519 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Sdc3Q64519 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Sdc3Q64519 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm14536-201ENSMUST00000118324 138 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm12686-201ENSMUST00000120546 397 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm15027-201ENSMUST00000120922 138 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm24385-201ENSMUST00000122694 350 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm26092-201ENSMUST00000179798 97 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Gm23571-201ENSMUST00000180073 127 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Rny1-201ENSMUST00000083767 112 ntBASIC1.33□□□□□ -2.2
Sdc3Q64519 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Sdc3Q64519 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm25495-201ENSMUST00000104431 131 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm16032-201ENSMUST00000118534 168 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm11204-201ENSMUST00000122438 147 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm23898-201ENSMUST00000158111 103 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Traj60-201ENSMUST00000167781 54 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm23047-201ENSMUST00000177661 94 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Mir466e-201ENSMUST00000198862 84 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm24453-201ENSMUST00000083346 76 ntBASIC1.32□□□□□ -2.2
Sdc3Q64519 Gm25759-201ENSMUST00000103988 129 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm22545-201ENSMUST00000104350 132 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm25720-201ENSMUST00000157503 105 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm22553-201ENSMUST00000157797 295 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm22862-201ENSMUST00000178593 121 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm42855-201ENSMUST00000197388 253 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.31□□□□□ -2.2
Sdc3Q64519 Snord96a-201ENSMUST00000082791 81 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm25627-201ENSMUST00000084003 153 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Sdc3Q64519 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Sdc3Q64519 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.31□□□□□ -2.2
Sdc3Q64519 Mir541-201ENSMUST00000102097 90 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm24915-201ENSMUST00000157288 78 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Mir1967-201ENSMUST00000157789 82 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.3□□□□□ -2.2
Sdc3Q64519 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm22258-201ENSMUST00000177645 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm26032-201ENSMUST00000178535 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm25210-201ENSMUST00000178813 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm25157-201ENSMUST00000178914 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm22046-201ENSMUST00000179027 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm22941-201ENSMUST00000179630 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm25471-201ENSMUST00000180126 94 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Mir8116-201ENSMUST00000184134 97 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.3□□□□□ -2.2
Sdc3Q64519 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 Gm37715-201ENSMUST00000193206 235 ntBASIC1.3□□□□□ -2.2
Sdc3Q64519 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 150.9 ms