Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Mir340-201ENSMUST00000083483 98 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CtcfQ61164 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CtcfQ61164 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CtcfQ61164 Mir1951-201ENSMUST00000157981 89 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm25920-201ENSMUST00000158307 99 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm25994-201ENSMUST00000175392 101 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm16404-201ENSMUST00000177739 468 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm26097-201ENSMUST00000179642 93 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm25253-201ENSMUST00000179958 107 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm14598-201ENSMUST00000180109 468 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Gm14625-201ENSMUST00000180231 468 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Mir21b-201ENSMUST00000184317 108 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Mir6950-201ENSMUST00000184438 73 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.09□□□□□ -2.07
CtcfQ61164 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CtcfQ61164 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm26077-201ENSMUST00000104064 123 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm15692-201ENSMUST00000152173 352 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm26150-201ENSMUST00000157426 151 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm22699-201ENSMUST00000175376 105 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm27722-201ENSMUST00000183908 76 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Mir7225-201ENSMUST00000184178 54 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm34139-201ENSMUST00000196166 294 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm42623-201ENSMUST00000197225 379 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm43199-201ENSMUST00000200019 307 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.08□□□□□ -2.08
CtcfQ61164 Mir222-201ENSMUST00000083537 79 ntBASIC2.08□□□□□ -2.08
CtcfQ61164 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CtcfQ61164 Gm24263-201ENSMUST00000104059 107 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm15861-201ENSMUST00000120979 339 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.07□□□□□ -2.08
CtcfQ61164 Gm22221-201ENSMUST00000157362 103 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 U6.1-201ENSMUST00000157443 101 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm24288-201ENSMUST00000157630 144 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm22553-201ENSMUST00000157797 295 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm22476-201ENSMUST00000158902 100 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm27511-201ENSMUST00000183502 127 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm27851-201ENSMUST00000183529 63 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Mir1291-201ENSMUST00000199842 117 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Snora34-201ENSMUST00000083402 138 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Mir200b-201ENSMUST00000083615 70 ntBASIC2.07□□□□□ -2.08
CtcfQ61164 Gm16328-201ENSMUST00000126985 196 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm25044-201ENSMUST00000158603 104 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm20613-201ENSMUST00000175828 345 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm5900-201ENSMUST00000179862 375 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Mir6995-201ENSMUST00000183658 71 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CtcfQ61164 Gm23140-201ENSMUST00000082487 107 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm25812-201ENSMUST00000082751 103 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm24615-201ENSMUST00000083268 113 ntBASIC2.06□□□□□ -2.08
CtcfQ61164 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.06□□□□□ -2.08
CtcfQ61164 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.06□□□□□ -2.08
CtcfQ61164 Gm15214-201ENSMUST00000122155 470 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 Gm24770-201ENSMUST00000158505 92 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 Gm22297-201ENSMUST00000083312 106 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.05□□□□□ -2.08
CtcfQ61164 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CtcfQ61164 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CtcfQ61164 Gm22051-201ENSMUST00000117002 127 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm22586-201ENSMUST00000157507 122 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm26403-201ENSMUST00000158500 105 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Mir7683-201ENSMUST00000183842 61 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Mir6901-201ENSMUST00000185062 62 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm18546-201ENSMUST00000197245 676 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm44470-201ENSMUST00000203913 142 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm24151-201ENSMUST00000082758 141 ntBASIC2.04□□□□□ -2.08
CtcfQ61164 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm24276-201ENSMUST00000102181 110 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm26293-201ENSMUST00000104170 84 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CtcfQ61164 Gm23277-201ENSMUST00000157914 136 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Mir1966-201ENSMUST00000158807 108 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm5010-201ENSMUST00000213131 260 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm24536-201ENSMUST00000083144 107 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm24929-201ENSMUST00000083403 139 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 Gm24412-201ENSMUST00000083426 109 ntBASIC2.03□□□□□ -2.08
CtcfQ61164 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.03□□□□□ -2.09
CtcfQ61164 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CtcfQ61164 Gm23015-201ENSMUST00000104145 128 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm24586-201ENSMUST00000116695 89 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm22556-201ENSMUST00000157803 100 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm22557-201ENSMUST00000157804 102 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm25267-201ENSMUST00000158522 63 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm24054-201ENSMUST00000158619 105 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm27668-201ENSMUST00000184188 120 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.02□□□□□ -2.09
CtcfQ61164 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.02□□□□□ -2.09
CtcfQ61164 Gm26922-201ENSMUST00000082687 72 ntBASIC2.02□□□□□ -2.09
CtcfQ61164 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CtcfQ61164 Gm24098-201ENSMUST00000102075 109 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms