Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm26332-201ENSMUST00000179813 94 ntBASIC-0.65□□□□□ -2.51
Trav6d-4Q5R1I0 Gm23144-201ENSMUST00000180226 107 ntBASIC-0.65□□□□□ -2.51
Trav6d-4Q5R1I0 Gm22863-201ENSMUST00000180265 94 ntBASIC-0.65□□□□□ -2.51
Trav6d-4Q5R1I0 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.65□□□□□ -2.51
Trav6d-4Q5R1I0 AC164297.3-201ENSMUST00000224238 94 ntBASIC-0.65□□□□□ -2.51
Trav6d-4Q5R1I0 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.66□□□□□ -2.52
Trav6d-4Q5R1I0 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23958-201ENSMUST00000157207 105 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22186-201ENSMUST00000157822 122 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm26271-201ENSMUST00000158349 104 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.67□□□□□ -2.52
Trav6d-4Q5R1I0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Mir327-201ENSMUST00000199328 69 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Mir465-201ENSMUST00000093563 74 ntBASIC-0.68□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23557-201ENSMUST00000157820 138 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Mir377-201ENSMUST00000083504 68 ntBASIC-0.69□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24005-201ENSMUST00000158459 296 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm10177-202ENSMUST00000161698 207 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24356-201ENSMUST00000082859 106 ntBASIC-0.7□□□□□ -2.52
Trav6d-4Q5R1I0 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23981-201ENSMUST00000157136 106 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.71□□□□□ -2.52
Trav6d-4Q5R1I0 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm27385-201ENSMUST00000184747 104 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm38333-201ENSMUST00000193608 604 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.72□□□□□ -2.52
Trav6d-4Q5R1I0 Mir547-201ENSMUST00000102051 78 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Gm22447-201ENSMUST00000158155 92 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Mir532-201ENSMUST00000093630 96 ntBASIC-0.73□□□□□ -2.53
Trav6d-4Q5R1I0 Mir450-2-201ENSMUST00000102444 69 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms