Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm12432-201ENSMUST00000119540 186 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm23760-201ENSMUST00000158350 116 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm25715-201ENSMUST00000158627 125 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm37338-201ENSMUST00000191986 127 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm45508-201ENSMUST00000209298 299 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.42□□□□□ -2.34
Trav3-3Q5R1C3 Gm26082-201ENSMUST00000104070 127 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm25506-201ENSMUST00000104339 70 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm23536-201ENSMUST00000157541 134 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm23584-201ENSMUST00000157655 129 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm23779-201ENSMUST00000157938 64 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm23665-201ENSMUST00000158054 62 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm25558-201ENSMUST00000158083 106 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm37763-201ENSMUST00000193445 120 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Mir3535-201ENSMUST00000197651 147 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm25636-201ENSMUST00000082666 133 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm26111-201ENSMUST00000083969 106 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.41□□□□□ -2.34
Trav3-3Q5R1C3 Gm14307-201ENSMUST00000118930 291 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm11835-201ENSMUST00000120635 663 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm14297-201ENSMUST00000129110 291 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm16362-201ENSMUST00000135189 214 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm23262-201ENSMUST00000158323 168 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm27317-201ENSMUST00000183533 95 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
Trav3-3Q5R1C3 Snord89-201ENSMUST00000104516 110 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm24629-201ENSMUST00000122762 89 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm22814-201ENSMUST00000157452 104 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm24000-201ENSMUST00000158063 89 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm24880-201ENSMUST00000158776 85 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm29818-201ENSMUST00000218070 165 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm22283-201ENSMUST00000082556 161 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Rny3-201ENSMUST00000083011 102 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm24043-201ENSMUST00000083108 116 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.39□□□□□ -2.35
Trav3-3Q5R1C3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Gm22085-201ENSMUST00000158344 110 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Snora24-201ENSMUST00000174989 130 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Gm45471-201ENSMUST00000211270 281 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Gm22421-201ENSMUST00000083058 107 ntBASIC0.38□□□□□ -2.35
Trav3-3Q5R1C3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Mir709-201ENSMUST00000102190 88 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Gm25377-201ENSMUST00000104334 129 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Mir7663-201ENSMUST00000183950 61 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Snord42a-201ENSMUST00000082606 65 ntBASIC0.37□□□□□ -2.35
Trav3-3Q5R1C3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm44419-201ENSMUST00000203338 229 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm23404-201ENSMUST00000082543 97 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm23412-201ENSMUST00000083017 107 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm26495-201ENSMUST00000083152 137 ntBASIC0.36□□□□□ -2.35
Trav3-3Q5R1C3 Gm24345-201ENSMUST00000158706 124 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm28669-201ENSMUST00000188400 100 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm43976-201ENSMUST00000203637 235 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm44687-201ENSMUST00000204975 235 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm24616-201ENSMUST00000083274 139 ntBASIC0.35□□□□□ -2.35
Trav3-3Q5R1C3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm16539-201ENSMUST00000160086 327 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm28849-201ENSMUST00000188127 174 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm38060-201ENSMUST00000194822 464 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm44052-201ENSMUST00000203382 396 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Mir500-201ENSMUST00000093600 92 ntBASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trav3-3Q5R1C3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Trav3-3Q5R1C3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms