Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.56□□□□□ -2.5
Pds5bQ4VA53 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.56□□□□□ -2.5
Pds5bQ4VA53 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.56□□□□□ -2.5
Pds5bQ4VA53 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.57□□□□□ -2.5
Pds5bQ4VA53 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.57□□□□□ -2.5
Pds5bQ4VA53 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Pds5bQ4VA53 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Pds5bQ4VA53 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.57□□□□□ -2.5
Pds5bQ4VA53 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 Gm23725-201ENSMUST00000177876 107 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 Gm17906-201ENSMUST00000202480 901 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.58□□□□□ -2.5
Pds5bQ4VA53 Mir100-201ENSMUST00000175270 80 ntBASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Snord68-201ENSMUST00000082516 86 ntBASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.59□□□□□ -2.5
Pds5bQ4VA53 Mir547-201ENSMUST00000102051 78 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.6□□□□□ -2.51
Pds5bQ4VA53 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 AC100209.2-201ENSMUST00000224461 451 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 Gm22229-201ENSMUST00000082987 108 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.61□□□□□ -2.51
Pds5bQ4VA53 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.62□□□□□ -2.51
Pds5bQ4VA53 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Pds5bQ4VA53 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm23619-201ENSMUST00000178411 94 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm25474-201ENSMUST00000179052 94 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm22047-201ENSMUST00000179176 94 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Mir6346-201ENSMUST00000183982 81 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Mir465-201ENSMUST00000093563 74 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm26271-201ENSMUST00000158349 104 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm24308-201ENSMUST00000177773 114 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.64□□□□□ -2.51
Pds5bQ4VA53 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm23958-201ENSMUST00000157207 105 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm22186-201ENSMUST00000157822 122 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.65□□□□□ -2.51
Pds5bQ4VA53 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.66□□□□□ -2.52
Pds5bQ4VA53 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.67□□□□□ -2.52
Pds5bQ4VA53 Gm23981-201ENSMUST00000157136 106 ntBASIC-0.67□□□□□ -2.52
Pds5bQ4VA53 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-0.67□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 187.4 ms