Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Rnf180Q3U827 Gm22557-201ENSMUST00000157804 102 ntBASIC2.59□□□□□ -1.99
Rnf180Q3U827 Gm22510-201ENSMUST00000179304 79 ntBASIC2.59□□□□□ -1.99
Rnf180Q3U827 Gm26336-201ENSMUST00000179449 79 ntBASIC2.59□□□□□ -1.99
Rnf180Q3U827 Gm26390-201ENSMUST00000179628 79 ntBASIC2.59□□□□□ -1.99
Rnf180Q3U827 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Rnf180Q3U827 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.59□□□□□ -1.99
Rnf180Q3U827 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.59□□□□□ -2
Rnf180Q3U827 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.59□□□□□ -2
Rnf180Q3U827 Gm12432-201ENSMUST00000119540 186 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Gm22416-201ENSMUST00000158590 88 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Gm25119-201ENSMUST00000158815 88 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Gm27443-201ENSMUST00000184660 98 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Gm35736-201ENSMUST00000203681 313 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 Snord104-201ENSMUST00000083192 70 ntBASIC2.58□□□□□ -2
Rnf180Q3U827 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rnf180Q3U827 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Rnf180Q3U827 Gm25915-201ENSMUST00000104265 126 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm22148-201ENSMUST00000104445 107 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm6952-201ENSMUST00000118629 159 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm26277-201ENSMUST00000157097 152 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm22731-201ENSMUST00000158086 94 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Mir1966-201ENSMUST00000158807 108 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm17020-201ENSMUST00000172274 274 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm25071-201ENSMUST00000175232 70 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm25464-201ENSMUST00000175481 107 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm22686-201ENSMUST00000082847 100 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm24536-201ENSMUST00000083144 107 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 Gm22866-201ENSMUST00000083947 177 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.57□□□□□ -2
Rnf180Q3U827 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm25321-201ENSMUST00000122558 102 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm26345-201ENSMUST00000157534 120 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm16111-201ENSMUST00000162128 285 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm25470-201ENSMUST00000175576 111 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Mir7679-201ENSMUST00000183379 63 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Mir21b-201ENSMUST00000184317 108 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Mir7665-201ENSMUST00000184907 63 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm44052-201ENSMUST00000203382 396 ntBASIC2.56□□□□□ -2
Rnf180Q3U827 Gm26293-201ENSMUST00000104170 84 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm24632-201ENSMUST00000122770 323 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm25825-201ENSMUST00000157091 124 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Rnu7-201ENSMUST00000158458 62 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm26403-201ENSMUST00000158500 105 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm16546-201ENSMUST00000159442 355 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm22699-201ENSMUST00000175376 105 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm23090-201ENSMUST00000177331 78 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm28912-201ENSMUST00000189001 234 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.55□□□□□ -2
Rnf180Q3U827 Mir155-201ENSMUST00000083463 65 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Mir186-201ENSMUST00000083497 71 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Mir344-201ENSMUST00000083634 95 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.55□□□□□ -2
Rnf180Q3U827 Gm24263-201ENSMUST00000104059 107 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm14536-201ENSMUST00000118324 138 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm13922-201ENSMUST00000119505 156 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm15027-201ENSMUST00000120922 138 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.54□□□□□ -2
Rnf180Q3U827 Gm23718-201ENSMUST00000157350 307 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm24475-201ENSMUST00000157435 143 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm26160-201ENSMUST00000158965 63 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Mir6901-201ENSMUST00000185062 62 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm42960-201ENSMUST00000202160 241 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Gm8031-201ENSMUST00000213430 626 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.54□□□□□ -2
Rnf180Q3U827 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Rnf180Q3U827 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.53□□□□□ -2
Rnf180Q3U827 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.53□□□□□ -2
Rnf180Q3U827 Gm44859-201ENSMUST00000207831 94 ntBASIC2.53□□□□□ -2
Rnf180Q3U827 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.53□□□□□ -2
Rnf180Q3U827 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.53□□□□□ -2
Rnf180Q3U827 Snord118-201ENSMUST00000082965 135 ntBASIC2.53□□□□□ -2
Rnf180Q3U827 Gm22338-201ENSMUST00000157715 129 ntBASIC2.52□□□□□ -2.01
Rnf180Q3U827 Gm23409-201ENSMUST00000158516 237 ntBASIC2.52□□□□□ -2.01
Rnf180Q3U827 Mir1927-201ENSMUST00000158579 109 ntBASIC2.52□□□□□ -2.01
Rnf180Q3U827 Gm21064-202ENSMUST00000190583 278 ntBASIC2.52□□□□□ -2.01
Rnf180Q3U827 Gm37693-201ENSMUST00000194562 234 ntBASIC2.52□□□□□ -2.01
Rnf180Q3U827 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Rnf180Q3U827 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Rnf180Q3U827 Mir1298-201ENSMUST00000116681 98 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Gm22477-201ENSMUST00000122569 316 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Gm16328-201ENSMUST00000126985 196 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Gm24736-201ENSMUST00000158862 130 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Gm26157-201ENSMUST00000158974 126 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Mir6985-201ENSMUST00000184641 61 ntBASIC2.51□□□□□ -2.01
Rnf180Q3U827 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Rnf180Q3U827 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Rnf180Q3U827 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm22486-201ENSMUST00000116815 137 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm42623-201ENSMUST00000197225 379 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm44326-201ENSMUST00000198226 101 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.5□□□□□ -2.01
Rnf180Q3U827 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm25788-201ENSMUST00000082721 131 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 242.6 ms