Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col28a1Q2UY11 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm13560-201ENSMUST00000121865 329 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm23670-201ENSMUST00000157469 119 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm25460-201ENSMUST00000157954 127 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm22612-201ENSMUST00000158293 101 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm26435-201ENSMUST00000179026 107 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Mir7017-201ENSMUST00000184894 62 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm44024-201ENSMUST00000203008 476 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.05□□□□□ -2.08
Col28a1Q2UY11 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm25094-201ENSMUST00000103992 131 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm12513-201ENSMUST00000118617 352 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm25933-201ENSMUST00000178943 108 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm21064-202ENSMUST00000190583 278 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Gm24977-201ENSMUST00000083106 163 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Mir222-201ENSMUST00000083537 79 ntBASIC2.04□□□□□ -2.08
Col28a1Q2UY11 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col28a1Q2UY11 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm22935-201ENSMUST00000103960 104 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm26077-201ENSMUST00000104064 123 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm6954-201ENSMUST00000117416 225 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm2830-201ENSMUST00000140330 385 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm23324-201ENSMUST00000157421 131 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm23665-201ENSMUST00000158054 62 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm24177-201ENSMUST00000158927 131 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm43512-201ENSMUST00000198495 176 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm22972-201ENSMUST00000083297 131 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col28a1Q2UY11 Gm16186-201ENSMUST00000120132 216 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm22213-201ENSMUST00000157564 119 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm23644-201ENSMUST00000157856 77 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm23813-201ENSMUST00000175153 77 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm28912-201ENSMUST00000189001 234 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm38364-201ENSMUST00000191814 179 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm44326-201ENSMUST00000198226 101 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm43898-201ENSMUST00000204456 424 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm23303-201ENSMUST00000082714 152 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Snord61-201ENSMUST00000083176 71 ntBASIC2.02□□□□□ -2.09
Col28a1Q2UY11 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm26081-201ENSMUST00000104068 132 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm15067-201ENSMUST00000119534 156 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm23434-201ENSMUST00000157179 100 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm25797-201ENSMUST00000082640 107 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm26126-201ENSMUST00000083188 164 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Mir340-201ENSMUST00000083483 98 ntBASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col28a1Q2UY11 Gm43540-201ENSMUST00000196320 3848 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm26011-201ENSMUST00000104410 104 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm13885-201ENSMUST00000117569 187 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm25888-201ENSMUST00000157778 302 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm27934-201ENSMUST00000158795 63 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Mir7657-201ENSMUST00000196051 57 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2□□□□□ -2.09
Col28a1Q2UY11 CT033785.1-201ENSMUST00000224872 272 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Mir30d-201ENSMUST00000083503 82 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm22576-201ENSMUST00000083733 104 ntBASIC2□□□□□ -2.09
Col28a1Q2UY11 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2□□□□□ -2.09
Col28a1Q2UY11 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col28a1Q2UY11 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm6444-201ENSMUST00000119611 458 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm25060-201ENSMUST00000157374 130 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm22946-201ENSMUST00000158558 82 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm24573-201ENSMUST00000175499 112 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm18665-201ENSMUST00000189783 270 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm22509-201ENSMUST00000082775 107 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Gm24030-201ENSMUST00000083931 164 ntBASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col28a1Q2UY11 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col28a1Q2UY11 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.98□□□□□ -2.09
Col28a1Q2UY11 Gm23015-201ENSMUST00000104145 128 ntBASIC1.98□□□□□ -2.09
Col28a1Q2UY11 Gm11644-201ENSMUST00000119735 150 ntBASIC1.98□□□□□ -2.09
Col28a1Q2UY11 Gm22221-201ENSMUST00000157362 103 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms