Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col17a1Q07563 Gm22105-201ENSMUST00000116734 116 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm25543-201ENSMUST00000122678 312 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm24478-201ENSMUST00000157439 158 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm23586-201ENSMUST00000157657 123 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm22515-201ENSMUST00000158273 305 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm24842-201ENSMUST00000158681 54 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm28755-201ENSMUST00000185773 199 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm24163-201ENSMUST00000093660 132 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col17a1Q07563 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm23013-201ENSMUST00000104146 106 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm26084-201ENSMUST00000157903 104 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col17a1Q07563 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.28□□□□□ -1.88
Col17a1Q07563 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Gm24984-201ENSMUST00000104454 133 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Gm14215-201ENSMUST00000120578 221 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Gm25269-201ENSMUST00000122601 104 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Mir9-3-201ENSMUST00000175497 90 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Gm44352-201ENSMUST00000196358 110 ntBASIC3.27□□□□□ -1.89
Col17a1Q07563 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col17a1Q07563 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col17a1Q07563 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm22761-201ENSMUST00000102278 96 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm22708-201ENSMUST00000158987 103 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm25464-201ENSMUST00000175481 107 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 Mir7052-201ENSMUST00000184821 65 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm22247-201ENSMUST00000082476 131 ntBASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col17a1Q07563 Gm11356-201ENSMUST00000118974 192 ntBASIC3.25□□□□□ -1.89
Col17a1Q07563 Gm12013-201ENSMUST00000121971 155 ntBASIC3.25□□□□□ -1.89
Col17a1Q07563 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col17a1Q07563 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.25□□□□□ -1.89
Col17a1Q07563 Gm25797-201ENSMUST00000082640 107 ntBASIC3.25□□□□□ -1.89
Col17a1Q07563 Snord89-201ENSMUST00000104516 110 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Mir1942-201ENSMUST00000157274 63 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm22729-201ENSMUST00000158088 129 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm22510-201ENSMUST00000179304 79 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm26336-201ENSMUST00000179449 79 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm26466-201ENSMUST00000179615 79 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm26390-201ENSMUST00000179628 79 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm29535-201ENSMUST00000185723 109 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm28143-201ENSMUST00000191082 109 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm22620-201ENSMUST00000082700 133 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.24□□□□□ -1.89
Col17a1Q07563 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col17a1Q07563 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col17a1Q07563 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Col17a1Q07563 Gm13560-201ENSMUST00000121865 329 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 Gm22561-201ENSMUST00000157331 84 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 Gm25831-201ENSMUST00000158924 163 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 Gm28409-201ENSMUST00000187064 103 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.23□□□□□ -1.89
Col17a1Q07563 Gm25142-201ENSMUST00000082698 107 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 Gm26166-201ENSMUST00000083788 107 ntBASIC3.23□□□□□ -1.89
Col17a1Q07563 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col17a1Q07563 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col17a1Q07563 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col17a1Q07563 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col17a1Q07563 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm14882-201ENSMUST00000117216 218 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm17161-201ENSMUST00000169187 524 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 mt-Tv-201ENSMUST00000082389 69 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm22454-201ENSMUST00000082583 107 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm23445-201ENSMUST00000082800 107 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm23907-201ENSMUST00000104595 189 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm16265-201ENSMUST00000134558 108 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm24747-201ENSMUST00000157835 87 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm43626-201ENSMUST00000198575 162 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm19563-201ENSMUST00000222031 270 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm24948-201ENSMUST00000082866 207 ntBASIC3.22□□□□□ -1.89
Col17a1Q07563 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col17a1Q07563 Gm24232-201ENSMUST00000104314 132 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm15069-201ENSMUST00000117792 192 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm15068-201ENSMUST00000119796 192 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm14588-201ENSMUST00000119895 172 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm24440-201ENSMUST00000157236 63 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm24902-201ENSMUST00000158126 123 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm22093-201ENSMUST00000158980 111 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm24512-201ENSMUST00000174963 65 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm17067-202ENSMUST00000180131 123 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Gm22421-201ENSMUST00000083058 107 ntBASIC3.21□□□□□ -1.9
Col17a1Q07563 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col17a1Q07563 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Col17a1Q07563 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col17a1Q07563 Gm23655-201ENSMUST00000122627 105 ntBASIC3.2□□□□□ -1.9
Col17a1Q07563 Gm26091-201ENSMUST00000122704 82 ntBASIC3.2□□□□□ -1.9
Col17a1Q07563 Gm24475-201ENSMUST00000157435 143 ntBASIC3.2□□□□□ -1.9
Col17a1Q07563 Gm23340-201ENSMUST00000158955 123 ntBASIC3.2□□□□□ -1.9
Col17a1Q07563 Mir6383-201ENSMUST00000184545 116 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 169.2 ms