| Cntn3 | Q07409 | Gm24922-201 | ENSMUST00000158511 | 102 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir7039-201 | ENSMUST00000183852 | 85 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm27668-201 | ENSMUST00000184188 | 120 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm37807-201 | ENSMUST00000194310 | 190 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir7657-201 | ENSMUST00000196051 | 57 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | AC168056.1-201 | ENSMUST00000225270 | 180 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22306-201 | ENSMUST00000082692 | 107 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir489-201 | ENSMUST00000093599 | 107 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Snhg14-213 | ENSMUST00000190666 | 3708 nt | TSL 1 (best) BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22674-201 | ENSMUST00000104413 | 131 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm14502-201 | ENSMUST00000118154 | 113 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm23434-201 | ENSMUST00000157179 | 100 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm23854-201 | ENSMUST00000158378 | 108 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm27645-201 | ENSMUST00000183348 | 77 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | AC155839.1-201 | ENSMUST00000200105 | 147 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm7214-201 | ENSMUST00000222428 | 272 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | AC115291.1-201 | ENSMUST00000226803 | 258 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | AC127371.3-201 | ENSMUST00000228129 | 415 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Hmgb1l-201 | ENSMUST00000082150 | 571 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | mt-Tf-201 | ENSMUST00000082387 | 68 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm25006-201 | ENSMUST00000083813 | 107 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gpr174-202 | ENSMUST00000117310 | 3536 nt | APPRIS P1 TSL 1 (best) BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Slc16a7-206 | ENSMUST00000211781 | 10981 nt | APPRIS P1 TSL 1 (best) BASIC | 2.76 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Tlr8-202 | ENSMUST00000112170 | 3431 nt | APPRIS P1 TSL 2 BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir682-201 | ENSMUST00000102281 | 96 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm25945-201 | ENSMUST00000122484 | 135 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm45886-201 | ENSMUST00000148141 | 342 nt | TSL 5 BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm25364-201 | ENSMUST00000158851 | 107 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir3092-201 | ENSMUST00000174954 | 96 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir3076-201 | ENSMUST00000175415 | 60 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm34276-201 | ENSMUST00000222558 | 439 nt | TSL 5 BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm25588-201 | ENSMUST00000082501 | 140 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm25788-201 | ENSMUST00000082721 | 131 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir19b-2-201 | ENSMUST00000083539 | 84 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir301-201 | ENSMUST00000083655 | 86 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Vmn1r29-204 | ENSMUST00000228038 | 4520 nt | APPRIS P1 BASIC | 2.75 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | U2surp-202 | ENSMUST00000079659 | 7630 nt | APPRIS P1 TSL 1 (best) BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Vmn1r185-211 | ENSMUST00000228467 | 6915 nt | APPRIS P1 BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Olfr659-202 | ENSMUST00000214986 | 4842 nt | APPRIS P1 TSL 5 BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22782-201 | ENSMUST00000104082 | 132 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24816-201 | ENSMUST00000175311 | 151 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | 1700112D23Rik-202 | ENSMUST00000193387 | 299 nt | TSL 2 BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm44464-201 | ENSMUST00000198010 | 138 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22509-201 | ENSMUST00000082775 | 107 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm23264-201 | ENSMUST00000083372 | 107 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24030-201 | ENSMUST00000083931 | 164 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22866-201 | ENSMUST00000083947 | 177 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Ranbp2-201 | ENSMUST00000003310 | 9608 nt | APPRIS P1 TSL 5 BASIC | 2.74 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Snord64-201 | ENSMUST00000104003 | 67 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22279-201 | ENSMUST00000157200 | 93 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24559-201 | ENSMUST00000157519 | 121 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24436-201 | ENSMUST00000157889 | 302 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm28669-201 | ENSMUST00000188400 | 100 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir300-201 | ENSMUST00000083485 | 79 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22154-201 | ENSMUST00000083844 | 131 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm10234-201 | ENSMUST00000089304 | 60 nt | APPRIS P1 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Vmn1r76-203 | ENSMUST00000226947 | 8145 nt | APPRIS ALT2 BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm32014-202 | ENSMUST00000215328 | 4168 nt | TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Vmn1r75-206 | ENSMUST00000228463 | 6508 nt | APPRIS P2 BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24234-201 | ENSMUST00000104316 | 107 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm26091-201 | ENSMUST00000122704 | 82 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22790-201 | ENSMUST00000157229 | 129 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir1931-201 | ENSMUST00000158589 | 119 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir3086-201 | ENSMUST00000175072 | 87 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm24333-201 | ENSMUST00000175101 | 84 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Mir669j-201 | ENSMUST00000179023 | 121 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Ighv1-1-201 | ENSMUST00000194912 | 291 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm3724-201 | ENSMUST00000197957 | 349 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | AC134601.3-201 | ENSMUST00000221682 | 154 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22622-201 | ENSMUST00000082870 | 129 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Olfr1161-203 | ENSMUST00000217006 | 3647 nt | APPRIS P1 TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Atp11c-205 | ENSMUST00000154051 | 6039 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| Cntn3 | Q07409 | Gm22651-201 | ENSMUST00000157872 | 94 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24851-201 | ENSMUST00000158028 | 103 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24038-201 | ENSMUST00000082872 | 159 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Mir9-2-201 | ENSMUST00000083490 | 72 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25627-201 | ENSMUST00000084003 | 153 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Traj39-201 | ENSMUST00000103703 | 63 nt | APPRIS P1 BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Traj20-201 | ENSMUST00000103721 | 58 nt | APPRIS P1 BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm26074-201 | ENSMUST00000104063 | 129 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22500-201 | ENSMUST00000158982 | 99 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22708-201 | ENSMUST00000158987 | 103 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Vmn1r185-204 | ENSMUST00000227411 | 4928 nt | APPRIS P1 BASIC | 2.7 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm15281-201 | ENSMUST00000125181 | 351 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24358-201 | ENSMUST00000158424 | 288 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24082-201 | ENSMUST00000175175 | 83 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm28900-201 | ENSMUST00000185232 | 156 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm26494-201 | ENSMUST00000083154 | 143 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm24493-201 | ENSMUST00000083805 | 143 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Olfr1442-204 | ENSMUST00000208657 | 3148 nt | APPRIS P1 TSL 3 BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Olfr251-202 | ENSMUST00000214865 | 4930 nt | APPRIS ALT2 TSL 5 BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | G2e3-203 | ENSMUST00000121521 | 2594 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Vmn1r76-202 | ENSMUST00000226300 | 8189 nt | APPRIS ALT2 BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Scgb1b23-ps-201 | ENSMUST00000116009 | 252 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25753-201 | ENSMUST00000116792 | 121 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm13588-201 | ENSMUST00000120026 | 135 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm25623-201 | ENSMUST00000157216 | 108 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm23859-201 | ENSMUST00000158383 | 64 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Gm22163-201 | ENSMUST00000158408 | 135 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| Cntn3 | Q07409 | Mir6388-201 | ENSMUST00000184417 | 75 nt | BASIC | 2.68 | □□□□□ -1.98 | | |