Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm15272-201ENSMUST00000120865 233 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm22451-201ENSMUST00000122803 151 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm35736-201ENSMUST00000203681 313 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm43932-201ENSMUST00000204499 52 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm9370-201ENSMUST00000222787 609 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm25199-201ENSMUST00000083095 104 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.63□□□□□ -1.99
Msx2Q03358 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
Msx2Q03358 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Msx2Q03358 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Msx2Q03358 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Msx2Q03358 Gm22023-201ENSMUST00000104354 130 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm22956-201ENSMUST00000122520 80 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm15281-201ENSMUST00000125181 351 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm24572-201ENSMUST00000175505 88 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm26498-201ENSMUST00000177799 79 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Snord50a-201ENSMUST00000178154 72 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm24463-201ENSMUST00000178417 72 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm26230-201ENSMUST00000180141 79 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm37081-201ENSMUST00000192034 196 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm44491-201ENSMUST00000196794 96 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Msx2Q03358 Gm44478-201ENSMUST00000204875 114 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.62□□□□□ -1.99
Msx2Q03358 Gm45429-201ENSMUST00000209527 172 ntBASIC2.62□□□□□ -1.99
Msx2Q03358 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm12412-201ENSMUST00000121867 328 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm7209-201ENSMUST00000122339 333 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm25476-201ENSMUST00000175125 185 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Mir6386-201ENSMUST00000183558 104 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm44903-201ENSMUST00000206840 130 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm36776-201ENSMUST00000207006 203 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Gm24697-201ENSMUST00000083881 107 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.61□□□□□ -1.99
Msx2Q03358 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.61□□□□□ -1.99
Msx2Q03358 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Msx2Q03358 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.6□□□□□ -1.99
Msx2Q03358 Gm26420-201ENSMUST00000104273 103 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm24468-201ENSMUST00000104489 104 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm22679-201ENSMUST00000116975 100 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm22796-201ENSMUST00000157234 106 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm22228-201ENSMUST00000157364 101 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm22163-201ENSMUST00000158408 135 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm25771-201ENSMUST00000158565 144 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Mir3083-201ENSMUST00000175377 64 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm28669-201ENSMUST00000188400 100 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm28270-201ENSMUST00000188550 109 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm28328-201ENSMUST00000188869 109 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm26458-201ENSMUST00000082832 128 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Msx2Q03358 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.6□□□□□ -1.99
Msx2Q03358 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Msx2Q03358 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msx2Q03358 Gm3788-201ENSMUST00000119949 136 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm25045-201ENSMUST00000122670 99 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm24632-201ENSMUST00000122770 323 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm25978-201ENSMUST00000158698 90 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm23190-201ENSMUST00000180307 64 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm27786-201ENSMUST00000184337 70 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm29535-201ENSMUST00000185723 109 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm28143-201ENSMUST00000191082 109 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.59□□□□□ -1.99
Msx2Q03358 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Gm26175-201ENSMUST00000083794 131 ntBASIC2.59□□□□□ -1.99
Msx2Q03358 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msx2Q03358 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Msx2Q03358 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Msx2Q03358 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.58□□□□□ -2
Msx2Q03358 Gm23380-201ENSMUST00000158448 103 ntBASIC2.58□□□□□ -2
Msx2Q03358 Gm23507-201ENSMUST00000083078 107 ntBASIC2.58□□□□□ -2
Msx2Q03358 Gm22827-201ENSMUST00000083766 107 ntBASIC2.58□□□□□ -2
Msx2Q03358 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Msx2Q03358 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msx2Q03358 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.58□□□□□ -2
Msx2Q03358 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.57□□□□□ -2
Msx2Q03358 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Msx2Q03358 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Msx2Q03358 Mir542-201ENSMUST00000102186 85 ntBASIC2.57□□□□□ -2
Msx2Q03358 Gm26150-201ENSMUST00000157426 151 ntBASIC2.57□□□□□ -2
Msx2Q03358 Gm26415-201ENSMUST00000157673 292 ntBASIC2.57□□□□□ -2
Msx2Q03358 Gm25769-201ENSMUST00000158569 127 ntBASIC2.57□□□□□ -2
Msx2Q03358 Gm25681-201ENSMUST00000083938 106 ntBASIC2.57□□□□□ -2
Msx2Q03358 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.57□□□□□ -2
Msx2Q03358 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.57□□□□□ -2
Msx2Q03358 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Msx2Q03358 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Msx2Q03358 Gm23747-201ENSMUST00000104228 131 ntBASIC2.56□□□□□ -2
Msx2Q03358 Snora36b-201ENSMUST00000104383 132 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm26473-201ENSMUST00000116763 127 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm25945-201ENSMUST00000122484 135 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm26253-201ENSMUST00000122493 103 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm25289-201ENSMUST00000122799 119 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm26466-201ENSMUST00000179615 79 ntBASIC2.56□□□□□ -2
Msx2Q03358 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.56□□□□□ -2
Msx2Q03358 Gm26326-201ENSMUST00000083070 129 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 166.4 ms