Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm25371-201ENSMUST00000158162 101 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm21885-201ENSMUST00000178891 327 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm27793-201ENSMUST00000183405 76 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm27878-201ENSMUST00000184000 106 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Mir7079-201ENSMUST00000184697 69 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm44052-201ENSMUST00000203382 396 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm45508-201ENSMUST00000209298 299 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm11351-202ENSMUST00000225724 478 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm12815-201ENSMUST00000121737 135 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm23258-201ENSMUST00000158319 106 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Snora24-201ENSMUST00000174989 130 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Gm42672-201ENSMUST00000197821 352 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.24□□□□□ -2.21
Col2a1P28481 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col2a1P28481 Gm26026-201ENSMUST00000122726 123 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Gm22221-201ENSMUST00000157362 103 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Gm28020-201ENSMUST00000157739 67 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Gm43865-201ENSMUST00000204721 127 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col2a1P28481 Gm25204-201ENSMUST00000082843 106 ntBASIC1.23□□□□□ -2.21
Col2a1P28481 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col2a1P28481 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Mir767-201ENSMUST00000103256 107 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm23492-201ENSMUST00000116837 115 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm23841-201ENSMUST00000116951 114 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm12143-201ENSMUST00000119666 332 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm22340-201ENSMUST00000157717 114 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm22731-201ENSMUST00000158086 94 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm26405-201ENSMUST00000158495 100 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm23090-201ENSMUST00000177331 78 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm25615-201ENSMUST00000177836 94 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm27694-201ENSMUST00000184740 86 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.22□□□□□ -2.21
Col2a1P28481 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.22□□□□□ -2.21
Col2a1P28481 Gm15281-201ENSMUST00000125181 351 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm24222-201ENSMUST00000158834 93 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm24415-201ENSMUST00000180218 107 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm18546-201ENSMUST00000197245 676 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm42774-201ENSMUST00000198854 283 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm6109-201ENSMUST00000223297 348 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col2a1P28481 Gm22248-201ENSMUST00000082482 150 ntBASIC1.21□□□□□ -2.22
Col2a1P28481 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col2a1P28481 Gm25943-201ENSMUST00000103791 90 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm22485-201ENSMUST00000157990 109 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm25711-201ENSMUST00000158633 128 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm25285-201ENSMUST00000178951 90 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir6380-201ENSMUST00000184334 81 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm29022-201ENSMUST00000190702 225 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm43563-201ENSMUST00000196761 198 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm24625-201ENSMUST00000082622 130 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Gm24453-201ENSMUST00000083346 76 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Mir301-201ENSMUST00000083655 86 ntBASIC1.2□□□□□ -2.22
Col2a1P28481 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Col2a1P28481 Gm26089-201ENSMUST00000157898 107 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Rnu7-201ENSMUST00000158458 62 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Gm23182-201ENSMUST00000158688 135 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Mir7241-201ENSMUST00000184532 64 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Gm25482-201ENSMUST00000083225 107 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Gm22972-201ENSMUST00000083297 131 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Gm25410-201ENSMUST00000083758 137 ntBASIC1.19□□□□□ -2.22
Col2a1P28481 Mir541-201ENSMUST00000102097 90 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col2a1P28481 Gm22935-201ENSMUST00000103960 104 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm14838-201ENSMUST00000118913 248 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm25390-201ENSMUST00000157341 103 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm23219-201ENSMUST00000158123 87 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm25654-201ENSMUST00000158467 88 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm26022-201ENSMUST00000158663 108 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm20630-201ENSMUST00000177387 551 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm37715-201ENSMUST00000193206 235 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm37746-201ENSMUST00000193249 198 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm34139-201ENSMUST00000196166 294 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.18□□□□□ -2.22
Col2a1P28481 Gm35736-201ENSMUST00000203681 313 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm44563-201ENSMUST00000207958 178 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm22421-201ENSMUST00000083058 107 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm24977-201ENSMUST00000083106 163 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Mir146-201ENSMUST00000083667 65 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm26175-201ENSMUST00000083794 131 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm10360-201ENSMUST00000097219 272 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col2a1P28481 Gm26421-201ENSMUST00000104279 132 ntBASIC1.18□□□□□ -2.22
Col2a1P28481 Gm15214-201ENSMUST00000122155 470 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms