Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Sdc1P18828 Gm28256-201ENSMUST00000188953 139 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm28559-201ENSMUST00000190532 139 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm37763-201ENSMUST00000193445 120 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm43976-201ENSMUST00000203637 235 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm44687-201ENSMUST00000204975 235 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Gm29818-201ENSMUST00000218070 165 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Snord42a-201ENSMUST00000082606 65 ntBASIC0.53□□□□□ -2.32
Sdc1P18828 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.33
Sdc1P18828 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Sdc1P18828 Gm26082-201ENSMUST00000104070 127 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm15002-201ENSMUST00000118406 452 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm22796-201ENSMUST00000157234 106 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm23536-201ENSMUST00000157541 134 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Mir3079-201ENSMUST00000175428 90 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm42988-201ENSMUST00000198116 225 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm45508-201ENSMUST00000209298 299 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm23412-201ENSMUST00000083017 107 ntBASIC0.52□□□□□ -2.33
Sdc1P18828 Gm24629-201ENSMUST00000122762 89 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm25968-201ENSMUST00000157167 100 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm23760-201ENSMUST00000158350 116 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm16404-201ENSMUST00000177739 468 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm14598-201ENSMUST00000180109 468 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm14625-201ENSMUST00000180231 468 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm27894-201ENSMUST00000184177 92 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm44948-201ENSMUST00000209050 149 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm18188-201ENSMUST00000219386 478 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm23404-201ENSMUST00000082543 97 ntBASIC0.51□□□□□ -2.33
Sdc1P18828 Gm25378-201ENSMUST00000104333 129 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 Gm24909-201ENSMUST00000157290 280 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Sdc1P18828 Mir7009-201ENSMUST00000184519 64 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 Mir196b-201ENSMUST00000083509 85 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.5□□□□□ -2.33
Sdc1P18828 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.49□□□□□ -2.33
Sdc1P18828 Gm24000-201ENSMUST00000158063 89 ntBASIC0.49□□□□□ -2.33
Sdc1P18828 Snora24-201ENSMUST00000174989 130 ntBASIC0.49□□□□□ -2.33
Sdc1P18828 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Sdc1P18828 Mir101a-201ENSMUST00000083517 83 ntBASIC0.49□□□□□ -2.33
Sdc1P18828 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm23766-201ENSMUST00000103894 80 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm12432-201ENSMUST00000119540 186 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm24211-201ENSMUST00000158264 107 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm25715-201ENSMUST00000158627 125 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Mir1954-201ENSMUST00000175595 86 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm28849-201ENSMUST00000188127 174 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm44419-201ENSMUST00000203338 229 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm26495-201ENSMUST00000083152 137 ntBASIC0.48□□□□□ -2.33
Sdc1P18828 Gm22021-201ENSMUST00000104353 107 ntBASIC0.47□□□□□ -2.33
Sdc1P18828 Gm22814-201ENSMUST00000157452 104 ntBASIC0.47□□□□□ -2.33
Sdc1P18828 Gm23584-201ENSMUST00000157655 129 ntBASIC0.47□□□□□ -2.33
Sdc1P18828 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.47□□□□□ -2.33
Sdc1P18828 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.47□□□□□ -2.33
Sdc1P18828 Gm22283-201ENSMUST00000082556 161 ntBASIC0.47□□□□□ -2.33
Sdc1P18828 Gm22302-201ENSMUST00000082657 106 ntBASIC0.47□□□□□ -2.33
Sdc1P18828 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.46□□□□□ -2.34
Sdc1P18828 Gm25558-201ENSMUST00000158083 106 ntBASIC0.46□□□□□ -2.34
Sdc1P18828 Gm24880-201ENSMUST00000158776 85 ntBASIC0.46□□□□□ -2.34
Sdc1P18828 Gm22421-201ENSMUST00000083058 107 ntBASIC0.46□□□□□ -2.34
Sdc1P18828 Gm25506-201ENSMUST00000104339 70 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Gm26484-201ENSMUST00000158018 106 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Gm24345-201ENSMUST00000158706 124 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Gm16539-201ENSMUST00000160086 327 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Mir3109-201ENSMUST00000175301 88 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Mir7663-201ENSMUST00000183950 61 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Mir7052-201ENSMUST00000184821 65 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Sdc1P18828 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.45□□□□□ -2.34
Sdc1P18828 Gm24385-201ENSMUST00000122694 350 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Gm23982-201ENSMUST00000157141 106 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Mir3968-201ENSMUST00000175355 100 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Gm23714-201ENSMUST00000179259 105 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Gm26073-201ENSMUST00000179906 127 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Gm27289-201ENSMUST00000183341 82 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.44□□□□□ -2.34
Sdc1P18828 Gm24624-201ENSMUST00000082617 164 ntBASIC0.44□□□□□ -2.34
Sdc1P18828 Mir709-201ENSMUST00000102190 88 ntBASIC0.43□□□□□ -2.34
Sdc1P18828 Gm26236-201ENSMUST00000175536 137 ntBASIC0.43□□□□□ -2.34
Sdc1P18828 Gm7258-201ENSMUST00000179317 300 ntBASIC0.43□□□□□ -2.34
Sdc1P18828 Gm28669-201ENSMUST00000188400 100 ntBASIC0.43□□□□□ -2.34
Sdc1P18828 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.43□□□□□ -2.34
Sdc1P18828 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Sdc1P18828 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.42□□□□□ -2.34
Sdc1P18828 Snord89-201ENSMUST00000104516 110 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms