Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.56□□□□□ -2.32
Cdx1P18111 Gm37997-201ENSMUST00000193515 267 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Gm44473-201ENSMUST00000204039 152 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Gm44976-201ENSMUST00000205543 261 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.56□□□□□ -2.32
Cdx1P18111 Gm22364-201ENSMUST00000083097 98 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Gm24043-201ENSMUST00000083108 116 ntBASIC0.56□□□□□ -2.32
Cdx1P18111 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Cdx1P18111 Gm23708-201ENSMUST00000104367 123 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Cdx1P18111 Gm22032-201ENSMUST00000116946 116 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm11834-201ENSMUST00000122257 585 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm23474-201ENSMUST00000158884 75 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm23921-201ENSMUST00000175258 107 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm22114-201ENSMUST00000177756 107 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm28921-201ENSMUST00000190219 378 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm19777-201ENSMUST00000191940 358 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm36946-201ENSMUST00000192706 435 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm36956-201ENSMUST00000193830 214 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm43898-201ENSMUST00000204456 424 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm45543-201ENSMUST00000209327 88 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm30155-201ENSMUST00000223458 339 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm24042-201ENSMUST00000083114 103 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Mir490-201ENSMUST00000093567 84 ntBASIC0.55□□□□□ -2.32
Cdx1P18111 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm25378-201ENSMUST00000104333 129 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm16032-201ENSMUST00000118534 168 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm25783-201ENSMUST00000122525 190 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm22598-201ENSMUST00000157600 127 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm22085-201ENSMUST00000158344 110 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm22431-201ENSMUST00000158545 107 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm24818-201ENSMUST00000175093 161 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm22914-201ENSMUST00000175195 77 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm25247-201ENSMUST00000175475 90 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm7654-201ENSMUST00000186738 683 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.54□□□□□ -2.32
Cdx1P18111 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm22294-201ENSMUST00000083308 104 ntBASIC0.54□□□□□ -2.32
Cdx1P18111 Gm24116-201ENSMUST00000103975 107 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm15030-201ENSMUST00000119804 484 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm24629-201ENSMUST00000122762 89 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm22796-201ENSMUST00000157234 106 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm24440-201ENSMUST00000157236 63 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm23779-201ENSMUST00000157938 64 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm23262-201ENSMUST00000158323 168 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm26022-201ENSMUST00000158663 108 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm24512-201ENSMUST00000174963 65 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Cdx1P18111 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.53□□□□□ -2.32
Cdx1P18111 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm25937-201ENSMUST00000083912 107 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.53□□□□□ -2.32
Cdx1P18111 Gm14307-201ENSMUST00000118930 291 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm14297-201ENSMUST00000129110 291 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm16362-201ENSMUST00000135189 214 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm14298-201ENSMUST00000139032 237 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm16356-201ENSMUST00000143300 169 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Cdx1P18111 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Cdx1P18111 Gm22883-201ENSMUST00000157376 106 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm24772-201ENSMUST00000158507 110 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm23182-201ENSMUST00000158688 135 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm24678-201ENSMUST00000158756 104 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm28435-201ENSMUST00000185496 108 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Gm44419-201ENSMUST00000203338 229 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.52□□□□□ -2.33
Cdx1P18111 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Cdx1P18111 Gm26135-201ENSMUST00000101993 72 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Mir767-201ENSMUST00000103256 107 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm12647-201ENSMUST00000118977 265 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm14761-201ENSMUST00000121363 262 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm23996-201ENSMUST00000158062 131 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Mir3079-201ENSMUST00000175428 90 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Snord50b-201ENSMUST00000178497 72 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm27365-201ENSMUST00000184041 177 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm28211-201ENSMUST00000190920 315 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm38109-201ENSMUST00000195386 181 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm43884-201ENSMUST00000204251 559 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.51□□□□□ -2.33
Cdx1P18111 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Snord42a-201ENSMUST00000082606 65 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm25204-201ENSMUST00000082843 106 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm23412-201ENSMUST00000083017 107 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Mir34a-201ENSMUST00000083559 102 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Gm24164-201ENSMUST00000093663 104 ntBASIC0.51□□□□□ -2.33
Cdx1P18111 Mir1951-201ENSMUST00000157981 89 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms