Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm24639-201ENSMUST00000178518 79 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm25474-201ENSMUST00000179052 94 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm23076-201ENSMUST00000179082 79 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm25077-201ENSMUST00000179157 79 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm22047-201ENSMUST00000179176 94 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Mir18-201ENSMUST00000083469 96 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Col1a1P11087 Mir872-201ENSMUST00000104728 81 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm23981-201ENSMUST00000157136 106 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-0.25□□□□□ -2.45
Col1a1P11087 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm44960-201ENSMUST00000207403 141 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-0.25□□□□□ -2.45
Col1a1P11087 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-0.26□□□□□ -2.45
Col1a1P11087 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm22005-201ENSMUST00000082795 141 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Gm25789-201ENSMUST00000083294 76 ntBASIC-0.26□□□□□ -2.45
Col1a1P11087 Snord69-201ENSMUST00000104024 80 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm25131-201ENSMUST00000082653 151 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.27□□□□□ -2.45
Col1a1P11087 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Col1a1P11087 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Mir880-201ENSMUST00000104809 78 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.28□□□□□ -2.45
Col1a1P11087 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.28□□□□□ -2.45
Col1a1P11087 Snord68-201ENSMUST00000082516 86 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Snora20-201ENSMUST00000082703 128 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm26066-201ENSMUST00000083385 109 ntBASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
Col1a1P11087 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm26018-201ENSMUST00000104406 128 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
Col1a1P11087 AC124346.1-201ENSMUST00000218539 364 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Snora75-201ENSMUST00000082903 133 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Mir363-201ENSMUST00000093598 75 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Mir706-201ENSMUST00000102262 84 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.29□□□□□ -2.46
Col1a1P11087 Mir547-201ENSMUST00000102051 78 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm16358-201ENSMUST00000146046 210 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 AC100209.2-201ENSMUST00000224461 451 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.3□□□□□ -2.46
Col1a1P11087 Gm6369-201ENSMUST00000069626 412 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms