Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.7□□□□□ -2.14
Hoxa1P09022 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Hoxa1P09022 Gm22373-201ENSMUST00000104584 89 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Gm25323-201ENSMUST00000122555 103 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Gm23656-201ENSMUST00000122626 112 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Gm25558-201ENSMUST00000158083 106 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Mir1966-201ENSMUST00000158807 108 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Gm44338-201ENSMUST00000198614 110 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Gm44859-201ENSMUST00000207831 94 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Mir300-201ENSMUST00000083485 79 ntBASIC1.69□□□□□ -2.14
Hoxa1P09022 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Hoxa1P09022 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm24984-201ENSMUST00000104454 133 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm24010-201ENSMUST00000157731 282 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm24237-201ENSMUST00000157790 132 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm22946-201ENSMUST00000158558 82 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm26214-201ENSMUST00000158581 107 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm22500-201ENSMUST00000158982 99 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm25994-201ENSMUST00000175392 101 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Hoxa1P09022 Mir497-201ENSMUST00000200557 84 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.68□□□□□ -2.14
Hoxa1P09022 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.68□□□□□ -2.14
Hoxa1P09022 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Hoxa1P09022 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm26074-201ENSMUST00000104063 129 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm22674-201ENSMUST00000104413 131 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm25113-201ENSMUST00000157185 143 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm22967-201ENSMUST00000157956 239 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm23898-201ENSMUST00000158111 103 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm22612-201ENSMUST00000158293 101 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm22159-201ENSMUST00000158412 130 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm26360-201ENSMUST00000158872 103 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm23860-201ENSMUST00000179446 132 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Mir7016-201ENSMUST00000184308 72 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm29603-201ENSMUST00000186792 334 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm42719-201ENSMUST00000197393 355 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm18502-201ENSMUST00000218679 199 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.67□□□□□ -2.14
Hoxa1P09022 Gm26015-201ENSMUST00000104402 125 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm23320-201ENSMUST00000104462 127 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Snord100-201ENSMUST00000116836 74 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm24783-201ENSMUST00000157639 100 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm25460-201ENSMUST00000157954 127 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Mir6419-201ENSMUST00000184784 113 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm38364-201ENSMUST00000191814 179 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm8219-201ENSMUST00000218309 242 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Mir34a-201ENSMUST00000083559 102 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Mir151-201ENSMUST00000083678 68 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm24261-201ENSMUST00000083744 104 ntBASIC1.66□□□□□ -2.14
Hoxa1P09022 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.66□□□□□ -2.14
Hoxa1P09022 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.65□□□□□ -2.14
Hoxa1P09022 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm14709-201ENSMUST00000121225 304 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm15692-201ENSMUST00000152173 352 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm24559-201ENSMUST00000157519 121 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm22384-201ENSMUST00000158187 104 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm23342-201ENSMUST00000158958 115 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Snord87-201ENSMUST00000175437 87 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm23966-201ENSMUST00000179823 107 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm28669-201ENSMUST00000188400 100 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Hoxa1P09022 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Snord43-201ENSMUST00000199549 108 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Gm23947-201ENSMUST00000093636 107 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.65□□□□□ -2.15
Hoxa1P09022 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Hoxa1P09022 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm24263-201ENSMUST00000104059 107 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm15069-201ENSMUST00000117792 192 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm11598-201ENSMUST00000119257 357 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm15068-201ENSMUST00000119796 192 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Mir1949-201ENSMUST00000157434 141 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm25425-201ENSMUST00000157611 96 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.64□□□□□ -2.15
Hoxa1P09022 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm28409-201ENSMUST00000187064 103 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm44470-201ENSMUST00000203913 142 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm24165-201ENSMUST00000082718 128 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm22738-201ENSMUST00000083440 147 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.64□□□□□ -2.15
Hoxa1P09022 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Hoxa1P09022 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.63□□□□□ -2.15
Hoxa1P09022 Gm14567-201ENSMUST00000117155 174 ntBASIC1.63□□□□□ -2.15
Hoxa1P09022 Gm13246-201ENSMUST00000120994 315 ntBASIC1.63□□□□□ -2.15
Hoxa1P09022 Gm26004-201ENSMUST00000158804 116 ntBASIC1.63□□□□□ -2.15
Hoxa1P09022 Gm16584-201ENSMUST00000159267 189 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms