Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.85□□□□□ -2.11
Hcn3O88705 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Hcn3O88705 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Hcn3O88705 Gm26293-201ENSMUST00000104170 84 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Gm23208-201ENSMUST00000158666 127 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Mir3057-201ENSMUST00000175040 91 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Gm24656-201ENSMUST00000177548 132 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Gm22264-201ENSMUST00000178200 107 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Mir222-201ENSMUST00000083537 79 ntBASIC1.84□□□□□ -2.11
Hcn3O88705 Gm24098-201ENSMUST00000102075 109 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm25381-201ENSMUST00000102078 109 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm24276-201ENSMUST00000102181 110 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm23898-201ENSMUST00000158111 103 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm27517-201ENSMUST00000184347 236 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Mir6481-201ENSMUST00000184617 110 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm2077-201ENSMUST00000195017 319 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Mir721-201ENSMUST00000200230 88 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.83□□□□□ -2.12
Hcn3O88705 Mir34a-201ENSMUST00000083559 102 ntBASIC1.83□□□□□ -2.12
Hcn3O88705 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Snord72-201ENSMUST00000104549 81 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Hcn3O88705 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Gm13433-201ENSMUST00000121701 240 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 U6.1-201ENSMUST00000157443 101 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Mir1931-201ENSMUST00000158589 119 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Hcn3O88705 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.82□□□□□ -2.12
Hcn3O88705 Gm18188-201ENSMUST00000219386 478 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Gm25697-201ENSMUST00000082902 98 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Gm24805-201ENSMUST00000082931 104 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Gm22973-201ENSMUST00000083298 191 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 Mir221-201ENSMUST00000083488 95 ntBASIC1.82□□□□□ -2.12
Hcn3O88705 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm26077-201ENSMUST00000104064 123 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Mir669d-201ENSMUST00000104644 121 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm15067-201ENSMUST00000119534 156 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm24478-201ENSMUST00000157439 158 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm24634-201ENSMUST00000158672 107 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm24366-201ENSMUST00000175383 86 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm27511-201ENSMUST00000183502 127 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm37778-201ENSMUST00000191732 190 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Mir7021-201ENSMUST00000197026 63 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Hcn3O88705 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.81□□□□□ -2.12
Hcn3O88705 Gm14709-201ENSMUST00000121225 304 ntBASIC1.8□□□□□ -2.12
Hcn3O88705 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.8□□□□□ -2.12
Hcn3O88705 Gm26345-201ENSMUST00000157534 120 ntBASIC1.8□□□□□ -2.12
Hcn3O88705 Gm24750-201ENSMUST00000157843 104 ntBASIC1.8□□□□□ -2.12
Hcn3O88705 Gm25464-201ENSMUST00000175481 107 ntBASIC1.8□□□□□ -2.12
Hcn3O88705 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.8□□□□□ -2.12
Hcn3O88705 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.8□□□□□ -2.12
Hcn3O88705 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Hcn3O88705 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Gm22664-201ENSMUST00000158719 105 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Gm25035-201ENSMUST00000175414 77 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Mir6350-201ENSMUST00000183639 105 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Gm27959-201ENSMUST00000185172 111 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Gm37997-201ENSMUST00000193515 267 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Mir322-201ENSMUST00000083484 95 ntBASIC1.79□□□□□ -2.12
Hcn3O88705 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Hcn3O88705 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Hcn3O88705 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Hcn3O88705 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.78□□□□□ -2.12
Hcn3O88705 Mir223-201ENSMUST00000102112 110 ntBASIC1.78□□□□□ -2.12
Hcn3O88705 Gm6952-201ENSMUST00000118629 159 ntBASIC1.78□□□□□ -2.12
Hcn3O88705 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.78□□□□□ -2.12
Hcn3O88705 Gm44921-201ENSMUST00000205290 301 ntBASIC1.78□□□□□ -2.12
Hcn3O88705 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Hcn3O88705 Gm22545-201ENSMUST00000104350 132 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Mir3096-201ENSMUST00000116685 71 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm25985-201ENSMUST00000122677 107 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm16328-201ENSMUST00000126985 196 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm22989-201ENSMUST00000158313 86 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm26160-201ENSMUST00000158965 63 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Mir6997-201ENSMUST00000184313 71 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Mir7050-201ENSMUST00000184636 60 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm27443-201ENSMUST00000184660 98 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm29613-201ENSMUST00000185846 313 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm29544-201ENSMUST00000188860 313 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm28808-201ENSMUST00000190978 313 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm9251-201ENSMUST00000197202 628 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Snord80-202ENSMUST00000199023 77 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Gm24165-201ENSMUST00000082718 128 ntBASIC1.77□□□□□ -2.13
Hcn3O88705 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Hcn3O88705 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Hcn3O88705 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Hcn3O88705 Gm14674-201ENSMUST00000117816 342 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm22386-201ENSMUST00000158192 129 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm26004-201ENSMUST00000158804 116 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm28669-201ENSMUST00000188400 100 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm43602-201ENSMUST00000196772 300 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm25820-202ENSMUST00000197479 128 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Hcn3O88705 Mir490-201ENSMUST00000093567 84 ntBASIC1.76□□□□□ -2.13
Hcn3O88705 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms