Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm23535-201ENSMUST00000157542 106 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm22731-201ENSMUST00000158086 94 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm27579-201ENSMUST00000158113 63 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Rnu7-201ENSMUST00000158458 62 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Snord11-201ENSMUST00000158468 84 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm27476-201ENSMUST00000183366 104 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm44962-201ENSMUST00000206460 279 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm44853-201ENSMUST00000209070 250 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm25589-201ENSMUST00000082502 166 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Snord14a-201ENSMUST00000082807 87 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm24042-201ENSMUST00000083114 103 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Gm25789-201ENSMUST00000083294 76 ntBASIC0.96□□□□□ -2.26
Col5a1O88207 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col5a1O88207 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm23892-201ENSMUST00000158105 130 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm20613-201ENSMUST00000175828 345 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm22450-201ENSMUST00000179641 107 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm25473-201ENSMUST00000180191 107 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm27421-201ENSMUST00000184729 167 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm42807-201ENSMUST00000200141 329 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm45386-201ENSMUST00000210194 218 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm24856-201ENSMUST00000082809 107 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm26071-201ENSMUST00000083261 107 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm24521-201ENSMUST00000083958 107 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Gm24163-201ENSMUST00000093660 132 ntBASIC0.95□□□□□ -2.26
Col5a1O88207 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
Col5a1O88207 Mir767-201ENSMUST00000103256 107 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 n-R5s158-201ENSMUST00000104095 118 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24867-201ENSMUST00000104161 107 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm23836-201ENSMUST00000104434 129 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm12797-201ENSMUST00000118645 273 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm6985-201ENSMUST00000121255 271 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm14491-201ENSMUST00000121919 199 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm23536-201ENSMUST00000157541 134 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm25012-201ENSMUST00000158396 164 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm22433-201ENSMUST00000158550 142 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm25711-201ENSMUST00000158633 128 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24277-201ENSMUST00000158661 104 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Mir28b-201ENSMUST00000175399 80 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Mir6336-201ENSMUST00000183581 130 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm29603-201ENSMUST00000186792 334 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Mir1291-201ENSMUST00000199842 117 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Col5a1O88207 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Snora34-201ENSMUST00000083402 138 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24164-201ENSMUST00000093663 104 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.94□□□□□ -2.26
Col5a1O88207 Mir541-201ENSMUST00000102097 90 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24865-201ENSMUST00000103246 96 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24640-201ENSMUST00000116949 126 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm22626-201ENSMUST00000116990 126 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm13885-201ENSMUST00000117569 187 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm23101-201ENSMUST00000157550 137 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm23901-201ENSMUST00000157570 107 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm22553-201ENSMUST00000157797 295 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm23180-201ENSMUST00000158686 125 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24761-201ENSMUST00000179589 127 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm24488-201ENSMUST00000179934 127 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm25701-201ENSMUST00000179988 127 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm26431-201ENSMUST00000180199 127 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm42533-201ENSMUST00000196247 157 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm45002-201ENSMUST00000208045 120 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm22248-201ENSMUST00000082482 150 ntBASIC0.94□□□□□ -2.26
Col5a1O88207 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm26135-201ENSMUST00000101993 72 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm12417-201ENSMUST00000119153 403 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm15861-201ENSMUST00000120979 339 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm28020-201ENSMUST00000157739 67 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm24006-201ENSMUST00000158462 132 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm20438-201ENSMUST00000174441 329 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Snord50b-201ENSMUST00000178497 72 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm45116-201ENSMUST00000207392 275 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm23039-201ENSMUST00000083870 161 ntBASIC0.93□□□□□ -2.26
Col5a1O88207 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col5a1O88207 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col5a1O88207 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col5a1O88207 Mir466p-201ENSMUST00000103925 89 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm24079-201ENSMUST00000104352 132 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm12143-201ENSMUST00000119666 332 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm11204-201ENSMUST00000122438 147 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm22338-201ENSMUST00000157715 129 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm26157-201ENSMUST00000158974 126 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm24390-201ENSMUST00000179578 62 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Mir6380-201ENSMUST00000184334 81 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm37715-201ENSMUST00000193206 235 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm37746-201ENSMUST00000193249 198 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm11351-202ENSMUST00000225724 478 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm24805-201ENSMUST00000082931 104 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Gm22973-201ENSMUST00000083298 191 ntBASIC0.92□□□□□ -2.26
Col5a1O88207 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms