Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm24984-201ENSMUST00000104454 133 ntBASIC1.72□□□□□ -2.13
DffbO54788 Mir344e-201ENSMUST00000104677 66 ntBASIC1.72□□□□□ -2.13
DffbO54788 Mir6995-201ENSMUST00000183658 71 ntBASIC1.72□□□□□ -2.13
DffbO54788 Mir7016-201ENSMUST00000184308 72 ntBASIC1.72□□□□□ -2.13
DffbO54788 Gm44322-201ENSMUST00000196830 115 ntBASIC1.72□□□□□ -2.13
DffbO54788 Gm25820-202ENSMUST00000197479 128 ntBASIC1.72□□□□□ -2.13
DffbO54788 Gm44057-201ENSMUST00000204547 96 ntBASIC1.72□□□□□ -2.13
DffbO54788 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.72□□□□□ -2.13
DffbO54788 Mir221-201ENSMUST00000083488 95 ntBASIC1.72□□□□□ -2.13
DffbO54788 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
DffbO54788 Gm15067-201ENSMUST00000119534 156 ntBASIC1.71□□□□□ -2.14
DffbO54788 Gm15281-201ENSMUST00000125181 351 ntBASIC1.71□□□□□ -2.14
DffbO54788 Gm23172-201ENSMUST00000157160 124 ntBASIC1.71□□□□□ -2.14
DffbO54788 Gm22989-201ENSMUST00000158313 86 ntBASIC1.71□□□□□ -2.14
DffbO54788 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.71□□□□□ -2.14
DffbO54788 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.71□□□□□ -2.14
DffbO54788 Mir7021-201ENSMUST00000197026 63 ntBASIC1.71□□□□□ -2.14
DffbO54788 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.71□□□□□ -2.14
DffbO54788 Gm44921-201ENSMUST00000205290 301 ntBASIC1.71□□□□□ -2.14
DffbO54788 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.71□□□□□ -2.14
DffbO54788 Gm24805-201ENSMUST00000082931 104 ntBASIC1.71□□□□□ -2.14
DffbO54788 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.7□□□□□ -2.14
DffbO54788 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
DffbO54788 Gm22148-201ENSMUST00000104445 107 ntBASIC1.7□□□□□ -2.14
DffbO54788 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm22606-201ENSMUST00000158290 103 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm25658-201ENSMUST00000158472 128 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm22476-201ENSMUST00000158902 100 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm24106-201ENSMUST00000175498 127 ntBASIC1.7□□□□□ -2.14
DffbO54788 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm22306-201ENSMUST00000082692 107 ntBASIC1.7□□□□□ -2.14
DffbO54788 Gm22704-201ENSMUST00000083027 137 ntBASIC1.7□□□□□ -2.14
DffbO54788 Mir34a-201ENSMUST00000083559 102 ntBASIC1.7□□□□□ -2.14
DffbO54788 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
DffbO54788 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
DffbO54788 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.69□□□□□ -2.14
DffbO54788 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
DffbO54788 Gm25485-201ENSMUST00000104120 132 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm23990-201ENSMUST00000117031 117 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm25599-201ENSMUST00000157816 103 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm23898-201ENSMUST00000158111 103 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm22163-201ENSMUST00000158408 135 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm26160-201ENSMUST00000158965 63 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm27959-201ENSMUST00000185172 111 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm28537-201ENSMUST00000189026 315 ntBASIC1.69□□□□□ -2.14
DffbO54788 Gm29631-201ENSMUST00000191065 315 ntBASIC1.69□□□□□ -2.14
DffbO54788 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.69□□□□□ -2.14
DffbO54788 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
DffbO54788 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.69□□□□□ -2.14
DffbO54788 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
DffbO54788 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
DffbO54788 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm22557-201ENSMUST00000157804 102 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm25558-201ENSMUST00000158083 106 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm24131-201ENSMUST00000158539 107 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.68□□□□□ -2.14
DffbO54788 Gm27928-201ENSMUST00000183747 256 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm43587-201ENSMUST00000199590 204 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm44922-201ENSMUST00000206690 90 ntBASIC1.68□□□□□ -2.14
DffbO54788 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.68□□□□□ -2.14
DffbO54788 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.68□□□□□ -2.14
DffbO54788 Mir222-201ENSMUST00000083537 79 ntBASIC1.68□□□□□ -2.14
DffbO54788 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
DffbO54788 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
DffbO54788 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm25828-201ENSMUST00000157087 95 ntBASIC1.67□□□□□ -2.14
DffbO54788 U6.1-201ENSMUST00000157443 101 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm24366-201ENSMUST00000175383 86 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm27544-201ENSMUST00000185069 155 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm9251-201ENSMUST00000197202 628 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm24165-201ENSMUST00000082718 128 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm24151-201ENSMUST00000082758 141 ntBASIC1.67□□□□□ -2.14
DffbO54788 Gm14674-201ENSMUST00000117816 342 ntBASIC1.66□□□□□ -2.14
DffbO54788 Gm23208-201ENSMUST00000158666 127 ntBASIC1.66□□□□□ -2.14
DffbO54788 Gm26864-201ENSMUST00000181346 156 ntBASIC1.66□□□□□ -2.14
DffbO54788 Gm27511-201ENSMUST00000183502 127 ntBASIC1.66□□□□□ -2.14
DffbO54788 Mir7683-201ENSMUST00000183842 61 ntBASIC1.66□□□□□ -2.14
DffbO54788 Mir6997-201ENSMUST00000184313 71 ntBASIC1.66□□□□□ -2.14
DffbO54788 Mir6950-201ENSMUST00000184438 73 ntBASIC1.66□□□□□ -2.14
DffbO54788 Gm19790-201ENSMUST00000214414 251 ntBASIC1.66□□□□□ -2.14
DffbO54788 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.66□□□□□ -2.14
DffbO54788 Mir322-201ENSMUST00000083484 95 ntBASIC1.66□□□□□ -2.14
DffbO54788 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
DffbO54788 Gm26077-201ENSMUST00000104064 123 ntBASIC1.65□□□□□ -2.15
DffbO54788 Mir3096-201ENSMUST00000116685 71 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm13922-201ENSMUST00000119505 156 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm13433-201ENSMUST00000121701 240 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm25323-201ENSMUST00000122555 103 ntBASIC1.65□□□□□ -2.15
DffbO54788 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm16404-201ENSMUST00000177739 468 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm22348-201ENSMUST00000178674 79 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm14598-201ENSMUST00000180109 468 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm14625-201ENSMUST00000180231 468 ntBASIC1.65□□□□□ -2.15
DffbO54788 Mir21b-201ENSMUST00000184317 108 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm28669-201ENSMUST00000188400 100 ntBASIC1.65□□□□□ -2.15
DffbO54788 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.65□□□□□ -2.15
DffbO54788 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
DffbO54788 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
DffbO54788 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms