Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Mir3086-201ENSMUST00000175072 87 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 Mir7021-201ENSMUST00000197026 63 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 Gm45754-201ENSMUST00000212380 279 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 Gm18188-201ENSMUST00000219386 478 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 Gm25513-201ENSMUST00000083861 162 ntBASIC1.73□□□□□ -2.13
Cldn4O35054 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Rnu7-201ENSMUST00000158458 62 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm25831-201ENSMUST00000158924 163 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm27285-201ENSMUST00000183875 127 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm28344-201ENSMUST00000185704 279 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm6003-201ENSMUST00000187903 463 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm37997-201ENSMUST00000193515 267 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.72□□□□□ -2.13
Cldn4O35054 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.72□□□□□ -2.13
Cldn4O35054 Gm25090-201ENSMUST00000104000 132 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Gm24632-201ENSMUST00000122770 323 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Gm22586-201ENSMUST00000157507 122 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Gm25914-201ENSMUST00000157618 153 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Gm26181-201ENSMUST00000157687 106 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Mir429-201ENSMUST00000083493 83 ntBASIC1.71□□□□□ -2.14
Cldn4O35054 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cldn4O35054 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cldn4O35054 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cldn4O35054 Gm22051-201ENSMUST00000117002 127 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Cldn4O35054 Gm24015-201ENSMUST00000157725 232 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Gm22768-201ENSMUST00000158366 153 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Gm23967-201ENSMUST00000175062 78 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Gm24656-201ENSMUST00000177548 132 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Gm43199-201ENSMUST00000200019 307 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Mir320-201ENSMUST00000083594 82 ntBASIC1.7□□□□□ -2.14
Cldn4O35054 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cldn4O35054 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Gm22337-201ENSMUST00000157721 132 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Gm24902-201ENSMUST00000158126 123 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Mir669k-201ENSMUST00000177742 127 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Gm25673-201ENSMUST00000179957 127 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.69□□□□□ -2.14
Cldn4O35054 Mir721-201ENSMUST00000200230 88 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Gm24165-201ENSMUST00000082718 128 ntBASIC1.69□□□□□ -2.14
Cldn4O35054 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Cldn4O35054 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Cldn4O35054 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cldn4O35054 Gm25538-201ENSMUST00000101943 107 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm25825-201ENSMUST00000157091 124 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm24783-201ENSMUST00000157639 100 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm25267-201ENSMUST00000158522 63 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm22665-201ENSMUST00000158720 275 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm26004-201ENSMUST00000158804 116 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm28794-201ENSMUST00000185276 136 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Gm9156-201ENSMUST00000189660 463 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Mir302d-201ENSMUST00000083513 66 ntBASIC1.68□□□□□ -2.14
Cldn4O35054 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Cldn4O35054 Mir873a-201ENSMUST00000104863 77 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm23209-201ENSMUST00000158667 110 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm24222-201ENSMUST00000158834 93 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Snord87-201ENSMUST00000175437 87 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm37624-201ENSMUST00000193751 219 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cldn4O35054 Gm5010-201ENSMUST00000213131 260 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm24929-201ENSMUST00000083403 139 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.67□□□□□ -2.14
Cldn4O35054 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.67□□□□□ -2.14
Cldn4O35054 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cldn4O35054 Gm14882-201ENSMUST00000117216 218 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm23172-201ENSMUST00000157160 124 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm22279-201ENSMUST00000157200 93 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm23854-201ENSMUST00000158378 108 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm23267-201ENSMUST00000178490 132 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm27928-201ENSMUST00000183747 256 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm28383-201ENSMUST00000187563 139 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cldn4O35054 Gm38183-201ENSMUST00000193189 205 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm36189-201ENSMUST00000204113 523 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Gm46993-201ENSMUST00000220708 259 ntBASIC1.66□□□□□ -2.14
Cldn4O35054 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Cldn4O35054 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.14
Cldn4O35054 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cldn4O35054 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Cldn4O35054 Gm26339-201ENSMUST00000102368 99 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Gm15115-201ENSMUST00000121145 264 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Gm20477-201ENSMUST00000174028 280 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Gm24572-201ENSMUST00000175505 88 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Mir6388-201ENSMUST00000184417 75 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.65□□□□□ -2.15
Cldn4O35054 Gm37693-201ENSMUST00000194562 234 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms