Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm22743-201ENSMUST00000083445 133 ntBASIC1.35□□□□□ -2.19
Trav13d-3J3QMG8 Mir320-201ENSMUST00000083594 82 ntBASIC1.35□□□□□ -2.19
Trav13d-3J3QMG8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Trav13d-3J3QMG8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav13d-3J3QMG8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm6897-201ENSMUST00000117714 138 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm14758-201ENSMUST00000119104 138 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm14709-201ENSMUST00000121225 304 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm22145-201ENSMUST00000157396 148 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm25720-201ENSMUST00000157503 105 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm22099-201ENSMUST00000157925 123 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm26482-201ENSMUST00000158015 62 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm23542-201ENSMUST00000158208 96 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm23113-201ENSMUST00000158477 99 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm26004-201ENSMUST00000158804 116 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Mir669k-201ENSMUST00000177742 127 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm25673-201ENSMUST00000179957 127 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Mir7062-201ENSMUST00000185038 66 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm44052-201ENSMUST00000203382 396 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm23423-201ENSMUST00000082782 106 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Gm25697-201ENSMUST00000082902 98 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Mir490-201ENSMUST00000093567 84 ntBASIC1.34□□□□□ -2.19
Trav13d-3J3QMG8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.2
Trav13d-3J3QMG8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Trav13d-3J3QMG8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm23048-201ENSMUST00000157237 129 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm22586-201ENSMUST00000157507 122 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm28020-201ENSMUST00000157739 67 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm27579-201ENSMUST00000158113 63 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm24677-201ENSMUST00000158755 150 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Gm43602-201ENSMUST00000196772 300 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav13d-3J3QMG8 Mir544-201ENSMUST00000103813 78 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm23951-201ENSMUST00000104029 132 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm24375-201ENSMUST00000104397 132 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm26026-201ENSMUST00000122726 123 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm22433-201ENSMUST00000158550 142 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Mir5104-201ENSMUST00000175319 94 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm36189-201ENSMUST00000204113 523 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm22744-201ENSMUST00000083444 65 ntBASIC1.32□□□□□ -2.2
Trav13d-3J3QMG8 Gm27402-201ENSMUST00000183890 120 ntBASIC1.31□□□□□ -2.2
Trav13d-3J3QMG8 Gm22884-201ENSMUST00000083127 140 ntBASIC1.31□□□□□ -2.2
Trav13d-3J3QMG8 Snord1a-201ENSMUST00000083160 74 ntBASIC1.31□□□□□ -2.2
Trav13d-3J3QMG8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Trav13d-3J3QMG8 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm24867-201ENSMUST00000104161 107 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm11334-201ENSMUST00000121969 156 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm23996-201ENSMUST00000158062 131 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm22164-201ENSMUST00000158413 106 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm22929-201ENSMUST00000175517 107 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.3□□□□□ -2.2
Trav13d-3J3QMG8 Gm25315-201ENSMUST00000116823 121 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm3788-201ENSMUST00000119949 136 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm13588-201ENSMUST00000120026 135 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm23277-201ENSMUST00000157914 136 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm26038-201ENSMUST00000158151 106 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm22403-201ENSMUST00000174919 84 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm27476-201ENSMUST00000183366 104 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm27585-201ENSMUST00000183717 199 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm43427-201ENSMUST00000198188 331 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Mir384-201ENSMUST00000083565 88 ntBASIC1.29□□□□□ -2.2
Trav13d-3J3QMG8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Snord19-201ENSMUST00000104609 76 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm25783-201ENSMUST00000122525 190 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm25015-201ENSMUST00000158400 128 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm25267-201ENSMUST00000158522 63 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm22888-201ENSMUST00000158640 77 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm25750-201ENSMUST00000175483 112 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm43199-201ENSMUST00000200019 307 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm24522-201ENSMUST00000083964 108 ntBASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav13d-3J3QMG8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Trav13d-3J3QMG8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Trav13d-3J3QMG8 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm24915-201ENSMUST00000157288 78 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm42855-201ENSMUST00000197388 253 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Gm45508-201ENSMUST00000209298 299 ntBASIC1.27□□□□□ -2.21
Trav13d-3J3QMG8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms