Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm28288-201ENSMUST00000191019 214 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23731-201ENSMUST00000083749 107 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm26090-201ENSMUST00000157897 128 ntBASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm37116-201ENSMUST00000195161 147 ntBASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm26314-201ENSMUST00000083891 107 ntBASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.18□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22143-201ENSMUST00000157401 203 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23113-201ENSMUST00000158477 99 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23917-201ENSMUST00000175256 98 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25120-201ENSMUST00000180148 79 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Snord49b-201ENSMUST00000082503 72 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25475-201ENSMUST00000082825 180 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Mir532-201ENSMUST00000093630 96 ntBASIC-1.19□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25563-201ENSMUST00000104603 74 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm13065-201ENSMUST00000119178 141 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm14989-201ENSMUST00000120497 207 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm14638-201ENSMUST00000121338 216 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm17067-202ENSMUST00000180131 123 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24355-201ENSMUST00000082858 122 ntBASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Trav4-3A0A0B4J1K1 Mir872-201ENSMUST00000104728 81 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24509-201ENSMUST00000157086 101 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25358-201ENSMUST00000157189 101 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm45232-201ENSMUST00000207811 162 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24623-201ENSMUST00000082616 194 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24043-201ENSMUST00000083108 116 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Mir363-201ENSMUST00000093598 75 ntBASIC-1.21□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25805-201ENSMUST00000122788 108 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25054-201ENSMUST00000157370 97 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm27735-201ENSMUST00000185085 76 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23058-201ENSMUST00000093703 107 ntBASIC-1.22□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm26384-201ENSMUST00000102183 110 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24468-201ENSMUST00000104489 104 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22030-201ENSMUST00000116942 63 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22435-201ENSMUST00000158552 128 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25772-201ENSMUST00000158574 56 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm27607-201ENSMUST00000185162 122 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm29513-201ENSMUST00000185741 202 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 AL627387.1-201ENSMUST00000226063 250 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 AC156574.2-201ENSMUST00000228023 282 ntBASIC-1.23□□□□□ -2.61
Trav4-3A0A0B4J1K1 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26158-201ENSMUST00000158973 119 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm42164-201ENSMUST00000198881 379 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 AC129208.2-201ENSMUST00000228506 320 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22508-201ENSMUST00000082772 110 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC-1.24□□□□□ -2.61
Trav4-3A0A0B4J1K1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26200-201ENSMUST00000180273 79 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm37338-201ENSMUST00000191986 127 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm36984-201ENSMUST00000192770 235 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44063-201ENSMUST00000203307 376 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44989-201ENSMUST00000204749 217 ntBASIC-1.25□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24596-201ENSMUST00000122504 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24467-201ENSMUST00000157887 126 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24584-201ENSMUST00000157972 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22541-201ENSMUST00000158165 127 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25211-201ENSMUST00000177553 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25245-201ENSMUST00000178139 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm26245-201ENSMUST00000178491 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23610-201ENSMUST00000178659 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25101-201ENSMUST00000179057 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23712-201ENSMUST00000179713 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25173-201ENSMUST00000179794 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24870-201ENSMUST00000179897 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm22645-201ENSMUST00000180010 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm24565-201ENSMUST00000180099 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm23805-201ENSMUST00000180129 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm25327-201ENSMUST00000180263 107 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm44954-201ENSMUST00000208513 227 ntBASIC-1.26□□□□□ -2.61
Trav4-3A0A0B4J1K1 Gm45544-201ENSMUST00000211130 88 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 174.7 ms