Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm29013-201ENSMUST00000187431 237 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm30155-201ENSMUST00000223458 339 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Mir410-201ENSMUST00000083563 81 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm23039-201ENSMUST00000083870 161 ntBASIC0.24□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm24880-201ENSMUST00000158776 85 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm10105-201ENSMUST00000184601 270 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm44352-201ENSMUST00000196358 110 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm45508-201ENSMUST00000209298 299 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm22283-201ENSMUST00000082556 161 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.23□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm24630-201ENSMUST00000122768 106 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm24504-201ENSMUST00000157679 100 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm23853-201ENSMUST00000158375 104 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm25976-201ENSMUST00000158695 130 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm24345-201ENSMUST00000158706 124 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm26400-201ENSMUST00000175012 85 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm28330-201ENSMUST00000190353 171 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm43367-201ENSMUST00000199986 625 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm43472-201ENSMUST00000200175 154 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Trbv5A0A0B4J1G9 Mir709-201ENSMUST00000102190 88 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm24909-201ENSMUST00000157290 280 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm24000-201ENSMUST00000158063 89 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm24499-201ENSMUST00000158446 104 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm25450-201ENSMUST00000179144 107 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.21□□□□□ -2.38
Trbv5A0A0B4J1G9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22673-201ENSMUST00000104415 131 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm14574-201ENSMUST00000120644 279 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm14761-201ENSMUST00000121363 262 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm24847-201ENSMUST00000158032 108 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23194-201ENSMUST00000158813 105 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm26073-201ENSMUST00000179906 127 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm44052-201ENSMUST00000203382 396 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm26107-201ENSMUST00000083972 107 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir451a-201ENSMUST00000093557 72 ntBASIC0.2□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm25170-201ENSMUST00000104191 129 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm13518-201ENSMUST00000120018 233 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir465d-201ENSMUST00000196314 58 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23377-201ENSMUST00000082943 126 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir448-201ENSMUST00000083516 112 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir10b-201ENSMUST00000083566 68 ntBASIC0.19□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23991-201ENSMUST00000117033 93 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm25318-201ENSMUST00000122554 314 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23101-201ENSMUST00000157550 137 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22945-201ENSMUST00000158557 157 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.18□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm11248-201ENSMUST00000119568 201 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm25558-201ENSMUST00000158083 106 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm27668-201ENSMUST00000184188 120 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm28669-201ENSMUST00000188400 100 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm43238-201ENSMUST00000196463 359 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.17□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22003-201ENSMUST00000101885 107 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm12837-201ENSMUST00000120131 373 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm12785-201ENSMUST00000122052 172 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23008-201ENSMUST00000158946 80 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm23410-201ENSMUST00000179967 107 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm22756-201ENSMUST00000180118 107 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm7654-201ENSMUST00000186738 683 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 Gm42506-201ENSMUST00000202009 150 ntBASIC0.16□□□□□ -2.38
Trbv5A0A0B4J1G9 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms