Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm26194-201ENSMUST00000175036 71 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm25671-201ENSMUST00000178612 105 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm23307-201ENSMUST00000179167 105 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm25286-201ENSMUST00000179790 105 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm27540-201ENSMUST00000184950 187 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Mir376a-201ENSMUST00000197584 68 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm23242-201ENSMUST00000083055 107 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm22294-201ENSMUST00000083308 104 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm22545-201ENSMUST00000104350 132 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm11834-201ENSMUST00000122257 585 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm25982-201ENSMUST00000157920 101 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm20630-201ENSMUST00000177387 551 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm25578-201ENSMUST00000083406 104 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm25937-201ENSMUST00000083912 107 ntBASIC0.78□□□□□ -2.28
Lmx1aQ9JKU8 Gm23708-201ENSMUST00000104367 123 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm24588-201ENSMUST00000116696 83 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm11334-201ENSMUST00000121969 156 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm14298-201ENSMUST00000139032 237 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm16356-201ENSMUST00000143300 169 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm24808-201ENSMUST00000157993 118 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm23759-201ENSMUST00000158351 268 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm22431-201ENSMUST00000158545 107 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm25450-201ENSMUST00000179144 107 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm23186-201ENSMUST00000180078 107 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm28661-201ENSMUST00000188231 681 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm44358-201ENSMUST00000196301 98 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.77□□□□□ -2.29
Lmx1aQ9JKU8 Gm24116-201ENSMUST00000103975 107 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm24431-201ENSMUST00000104073 66 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm14307-201ENSMUST00000118930 291 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm11794-201ENSMUST00000119446 237 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm25781-201ENSMUST00000122527 84 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm14297-201ENSMUST00000129110 291 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm16362-201ENSMUST00000135189 214 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm25884-201ENSMUST00000157782 62 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm23542-201ENSMUST00000158208 96 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm37845-201ENSMUST00000194977 355 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm44063-201ENSMUST00000203307 376 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm10264-201ENSMUST00000220589 429 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.76□□□□□ -2.29
Lmx1aQ9JKU8 Gm25825-201ENSMUST00000157091 124 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Gm25247-201ENSMUST00000175475 90 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Gm28211-201ENSMUST00000190920 315 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Mir465d-201ENSMUST00000196314 58 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Gm22364-201ENSMUST00000083097 98 ntBASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Lmx1aQ9JKU8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm22032-201ENSMUST00000116946 116 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm26022-201ENSMUST00000158663 108 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm28330-201ENSMUST00000190353 171 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm38109-201ENSMUST00000195386 181 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Snora41-201ENSMUST00000082668 132 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm26107-201ENSMUST00000083972 107 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.74□□□□□ -2.29
Lmx1aQ9JKU8 Gm23492-201ENSMUST00000116837 115 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm13560-201ENSMUST00000121865 329 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm26255-201ENSMUST00000122492 103 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm22477-201ENSMUST00000122569 316 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm22883-201ENSMUST00000157376 106 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm23898-201ENSMUST00000158111 103 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm24772-201ENSMUST00000158507 110 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm23182-201ENSMUST00000158688 135 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm22114-201ENSMUST00000177756 107 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm19777-201ENSMUST00000191940 358 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm37338-201ENSMUST00000191986 127 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm37763-201ENSMUST00000193445 120 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm23735-201ENSMUST00000082551 134 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm25930-201ENSMUST00000082785 107 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Gm22743-201ENSMUST00000083445 133 ntBASIC0.73□□□□□ -2.29
Lmx1aQ9JKU8 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.72□□□□□ -2.29
Lmx1aQ9JKU8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms