Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Gm45907-201ENSMUST00000213023 193 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Mir340-201ENSMUST00000083483 98 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Gm22003-201ENSMUST00000101885 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm14536-201ENSMUST00000118324 138 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm15027-201ENSMUST00000120922 138 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm23536-201ENSMUST00000157541 134 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm25749-201ENSMUST00000175485 111 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm23410-201ENSMUST00000179967 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22756-201ENSMUST00000180118 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22306-201ENSMUST00000082692 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22505-201ENSMUST00000082956 108 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22363-201ENSMUST00000083100 108 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm24536-201ENSMUST00000083144 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm23814-201ENSMUST00000083230 102 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm23095-201ENSMUST00000083446 107 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm23841-201ENSMUST00000116951 114 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm38019-201ENSMUST00000195133 380 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm46997-201ENSMUST00000222108 217 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm22571-201ENSMUST00000082984 70 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.27□□□□□ -2.21
Scn5aQ9JJV9 Gm14792-201ENSMUST00000119725 258 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm23101-201ENSMUST00000157550 137 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm23854-201ENSMUST00000158378 108 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm25069-201ENSMUST00000175238 86 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm27747-201ENSMUST00000184707 85 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Gm9795-201ENSMUST00000062156 693 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.26□□□□□ -2.21
Scn5aQ9JJV9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm11248-201ENSMUST00000119568 201 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm24629-201ENSMUST00000122762 89 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm37918-201ENSMUST00000192071 120 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm24909-201ENSMUST00000157290 280 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm27521-201ENSMUST00000184022 64 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm44491-201ENSMUST00000196794 96 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm25513-201ENSMUST00000083861 162 ntBASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
Scn5aQ9JJV9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm15002-201ENSMUST00000118406 452 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm14837-201ENSMUST00000119688 206 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm13711-201ENSMUST00000119708 453 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm22553-201ENSMUST00000157797 295 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm25718-201ENSMUST00000158632 118 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm22929-201ENSMUST00000175517 107 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm22118-201ENSMUST00000175593 171 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm25935-201ENSMUST00000178746 107 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm25141-201ENSMUST00000083177 107 ntBASIC1.24□□□□□ -2.21
Scn5aQ9JJV9 Gm24283-201ENSMUST00000104233 107 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Mir1951-201ENSMUST00000157981 89 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm23047-201ENSMUST00000177661 94 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm24163-201ENSMUST00000093660 132 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm11388-201ENSMUST00000120908 159 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm24385-201ENSMUST00000122694 350 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm25664-201ENSMUST00000157697 107 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm25333-201ENSMUST00000158035 246 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm26022-201ENSMUST00000158663 108 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm19855-201ENSMUST00000210145 249 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm25357-201ENSMUST00000082745 72 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Snora3-201ENSMUST00000083082 132 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Mir344-201ENSMUST00000083634 95 ntBASIC1.23□□□□□ -2.21
Scn5aQ9JJV9 Gm23419-201ENSMUST00000175523 84 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Gm20144-201ENSMUST00000203031 165 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Gm24316-201ENSMUST00000083041 107 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Gm24164-201ENSMUST00000093663 104 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.22□□□□□ -2.21
Scn5aQ9JJV9 Gm23492-201ENSMUST00000116837 115 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms