Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm24837-201ENSMUST00000158683 81 ntBASIC2.42□□□□□ -2.02
Ndc1Q8VCB1 Gm28900-201ENSMUST00000185232 156 ntBASIC2.42□□□□□ -2.02
Ndc1Q8VCB1 Gm29658-201ENSMUST00000185404 230 ntBASIC2.42□□□□□ -2.02
Ndc1Q8VCB1 Gm25797-201ENSMUST00000082640 107 ntBASIC2.42□□□□□ -2.02
Ndc1Q8VCB1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ndc1Q8VCB1 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Mir878-201ENSMUST00000104680 78 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Gm24075-201ENSMUST00000158175 72 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Gm27672-201ENSMUST00000183751 204 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Gm42719-201ENSMUST00000197393 355 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Gm44976-201ENSMUST00000205543 261 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Gm8219-201ENSMUST00000218309 242 ntBASIC2.41□□□□□ -2.02
Ndc1Q8VCB1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ndc1Q8VCB1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ndc1Q8VCB1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Mir293-201ENSMUST00000104841 80 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm14567-201ENSMUST00000117155 174 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm25060-201ENSMUST00000157374 130 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm24010-201ENSMUST00000157731 282 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm18665-201ENSMUST00000189783 270 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Trbv7-201ENSMUST00000193339 402 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm22306-201ENSMUST00000082692 107 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm23445-201ENSMUST00000082800 107 ntBASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ndc1Q8VCB1 Gm24274-201ENSMUST00000116787 124 ntBASIC2.39□□□□□ -2.03
Ndc1Q8VCB1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.39□□□□□ -2.03
Ndc1Q8VCB1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.39□□□□□ -2.03
Ndc1Q8VCB1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.39□□□□□ -2.03
Ndc1Q8VCB1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Ndc1Q8VCB1 Gm26339-201ENSMUST00000102368 99 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm14626-201ENSMUST00000117619 216 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm11644-201ENSMUST00000119735 150 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm13246-201ENSMUST00000120994 315 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm2830-201ENSMUST00000140330 385 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm22790-201ENSMUST00000157229 129 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Mir3961-201ENSMUST00000198795 59 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm23303-201ENSMUST00000082714 152 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Mir301-201ENSMUST00000083655 86 ntBASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Ndc1Q8VCB1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm23854-201ENSMUST00000158378 108 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm26157-201ENSMUST00000158974 126 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm44464-201ENSMUST00000198010 138 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm6109-201ENSMUST00000223297 348 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.37□□□□□ -2.03
Ndc1Q8VCB1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm24049-201ENSMUST00000102409 100 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm26074-201ENSMUST00000104063 129 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm15069-201ENSMUST00000117792 192 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm15068-201ENSMUST00000119796 192 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm25996-201ENSMUST00000175393 117 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Mir7068-201ENSMUST00000183439 74 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm44358-201ENSMUST00000196301 98 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Gm25357-201ENSMUST00000082745 72 ntBASIC2.36□□□□□ -2.03
Ndc1Q8VCB1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm26011-201ENSMUST00000104410 104 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm25529-201ENSMUST00000104850 92 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm24482-201ENSMUST00000117005 93 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm16186-201ENSMUST00000120132 216 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm24559-201ENSMUST00000157519 121 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm24747-201ENSMUST00000157835 87 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm24358-201ENSMUST00000158424 288 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm25707-201ENSMUST00000175120 96 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm29604-201ENSMUST00000187176 163 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm43381-201ENSMUST00000198553 165 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm25815-201ENSMUST00000082755 107 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gm25627-201ENSMUST00000084003 153 ntBASIC2.35□□□□□ -2.03
Ndc1Q8VCB1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm23803-201ENSMUST00000104610 132 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm23390-201ENSMUST00000157393 106 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm22163-201ENSMUST00000158408 135 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Mir3075-201ENSMUST00000175340 85 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm23567-201ENSMUST00000178005 107 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm28669-201ENSMUST00000188400 100 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm38298-201ENSMUST00000193578 118 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm37796-201ENSMUST00000195327 134 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm43898-201ENSMUST00000204456 424 ntBASIC2.34□□□□□ -2.03
Ndc1Q8VCB1 Gm25588-201ENSMUST00000082501 140 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 353.8 ms