Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm16404-201ENSMUST00000177739 468 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Gm26097-201ENSMUST00000179642 93 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Gm14598-201ENSMUST00000180109 468 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Gm14625-201ENSMUST00000180231 468 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Gm44922-201ENSMUST00000206690 90 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Mir222-201ENSMUST00000083537 79 ntBASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Ushbp1Q8R370 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm25267-201ENSMUST00000158522 63 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm22476-201ENSMUST00000158902 100 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm43587-201ENSMUST00000199590 204 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm25402-201ENSMUST00000082966 131 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.5□□□□□ -2.01
Ushbp1Q8R370 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm26077-201ENSMUST00000104064 123 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm22586-201ENSMUST00000157507 122 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm22083-201ENSMUST00000157586 102 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm24769-201ENSMUST00000158506 129 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm24510-201ENSMUST00000174965 94 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.49□□□□□ -2.01
Ushbp1Q8R370 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ushbp1Q8R370 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Gm23010-201ENSMUST00000104151 126 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Gm22148-201ENSMUST00000104445 107 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Gm26157-201ENSMUST00000158974 126 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Gm27898-201ENSMUST00000183987 80 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Mir7232-201ENSMUST00000197929 74 ntBASIC2.48□□□□□ -2.01
Ushbp1Q8R370 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ushbp1Q8R370 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm25094-201ENSMUST00000103992 131 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm26293-201ENSMUST00000104170 84 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm22699-201ENSMUST00000175376 105 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm5010-201ENSMUST00000213131 260 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm24929-201ENSMUST00000083403 139 ntBASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Ushbp1Q8R370 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Gm16510-201ENSMUST00000153501 249 ntBASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Gm26150-201ENSMUST00000157426 151 ntBASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Mir21b-201ENSMUST00000184317 108 ntBASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.46□□□□□ -2.02
Ushbp1Q8R370 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Gm25788-201ENSMUST00000082721 131 ntBASIC2.46□□□□□ -2.02
Ushbp1Q8R370 Gm13922-201ENSMUST00000119505 156 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm6444-201ENSMUST00000119611 458 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm22338-201ENSMUST00000157715 129 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm24900-201ENSMUST00000158128 134 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm25371-201ENSMUST00000158162 101 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Rnu7-201ENSMUST00000158458 62 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm16546-201ENSMUST00000159442 355 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm25464-201ENSMUST00000175481 107 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Mir7225-201ENSMUST00000184178 54 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm3724-201ENSMUST00000197957 349 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm42960-201ENSMUST00000202160 241 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Gm44859-201ENSMUST00000207831 94 ntBASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ushbp1Q8R370 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm6952-201ENSMUST00000118629 159 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm13560-201ENSMUST00000121865 329 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm22557-201ENSMUST00000157804 102 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm16162-201ENSMUST00000162296 297 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm25071-201ENSMUST00000175232 70 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Gm9156-201ENSMUST00000189660 463 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 Mir93-201ENSMUST00000083593 88 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.44□□□□□ -2.02
Ushbp1Q8R370 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Ushbp1Q8R370 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm26403-201ENSMUST00000158500 105 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm22093-201ENSMUST00000158980 111 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm23090-201ENSMUST00000177331 78 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm44052-201ENSMUST00000203382 396 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Snord118-201ENSMUST00000082965 135 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm24536-201ENSMUST00000083144 107 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Mir300-201ENSMUST00000083485 79 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Mir429-201ENSMUST00000083493 83 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Snora33-201ENSMUST00000093556 129 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.43□□□□□ -2.02
Ushbp1Q8R370 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
Ushbp1Q8R370 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.42□□□□□ -2.02
Ushbp1Q8R370 Gm24632-201ENSMUST00000122770 323 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms