Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm16162-201ENSMUST00000162296 297 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm20438-201ENSMUST00000174441 329 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm44308-201ENSMUST00000197080 99 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm44408-201ENSMUST00000200205 66 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Mir758-201ENSMUST00000103260 81 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm13560-201ENSMUST00000121865 329 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm25113-201ENSMUST00000157185 143 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm22586-201ENSMUST00000157507 122 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm24237-201ENSMUST00000157790 132 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm24131-201ENSMUST00000158539 107 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm25491-201ENSMUST00000158733 308 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm23289-201ENSMUST00000175615 108 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm16404-201ENSMUST00000177739 468 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm14598-201ENSMUST00000180109 468 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm14625-201ENSMUST00000180231 468 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm18546-201ENSMUST00000197245 676 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm25820-201ENSMUST00000198589 127 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Mir7215-201ENSMUST00000200383 51 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 Gm7214-201ENSMUST00000222428 272 ntBASIC2.38□□□□□ -2.03
Vps53Q8CCB4 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm23665-201ENSMUST00000158054 62 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm22510-201ENSMUST00000179304 79 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm26336-201ENSMUST00000179449 79 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm26390-201ENSMUST00000179628 79 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm25081-201ENSMUST00000082534 108 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm24929-201ENSMUST00000083403 139 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm22723-201ENSMUST00000083820 129 ntBASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Vps53Q8CCB4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm25938-201ENSMUST00000104139 166 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm24595-201ENSMUST00000122501 110 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm26150-201ENSMUST00000157426 151 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Mir669n-201ENSMUST00000158636 54 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm22476-201ENSMUST00000158902 100 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm42807-201ENSMUST00000200141 329 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Gm44938-201ENSMUST00000208614 427 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.36□□□□□ -2.03
Vps53Q8CCB4 Snord89-201ENSMUST00000104516 110 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm6025-201ENSMUST00000121517 201 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm25460-201ENSMUST00000157954 127 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm25996-201ENSMUST00000175393 117 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Mir7016-201ENSMUST00000184308 72 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Mir6376-201ENSMUST00000185149 131 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm44491-201ENSMUST00000196794 96 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm43749-201ENSMUST00000199345 352 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Vps53Q8CCB4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Gm23109-201ENSMUST00000116867 126 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Gm6109-201ENSMUST00000223297 348 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Gm24536-201ENSMUST00000083144 107 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Mir93-201ENSMUST00000083593 88 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.34□□□□□ -2.03
Vps53Q8CCB4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm26018-201ENSMUST00000104406 128 ntBASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm23342-201ENSMUST00000158958 115 ntBASIC2.33□□□□□ -2.04
Vps53Q8CCB4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm45386-201ENSMUST00000210194 218 ntBASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm5010-201ENSMUST00000213131 260 ntBASIC2.33□□□□□ -2.04
Vps53Q8CCB4 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.33□□□□□ -2.04
Vps53Q8CCB4 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Mir3096-201ENSMUST00000116685 71 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm23983-201ENSMUST00000157142 114 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm23043-201ENSMUST00000157890 109 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm25716-201ENSMUST00000158628 104 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm21885-201ENSMUST00000178891 327 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm27898-201ENSMUST00000183987 80 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm27878-201ENSMUST00000184000 106 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm44922-201ENSMUST00000206690 90 ntBASIC2.32□□□□□ -2.04
Vps53Q8CCB4 Gm22731-201ENSMUST00000158086 94 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm22606-201ENSMUST00000158290 103 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm26097-201ENSMUST00000179642 93 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm26922-201ENSMUST00000082687 72 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm25513-201ENSMUST00000083861 162 ntBASIC2.31□□□□□ -2.04
Vps53Q8CCB4 Gm23655-201ENSMUST00000122627 105 ntBASIC2.3□□□□□ -2.04
Vps53Q8CCB4 Gm35736-201ENSMUST00000203681 313 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms