Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim47Q8C0E3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm23015-201ENSMUST00000104145 128 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm16021-201ENSMUST00000121176 219 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Mir7050-201ENSMUST00000184636 60 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm45456-201ENSMUST00000210841 243 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Mir155-201ENSMUST00000083463 65 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm45265-201ENSMUST00000210852 2497 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm22322-201ENSMUST00000157151 111 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm23668-201ENSMUST00000157465 111 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm23261-201ENSMUST00000158316 136 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm24510-201ENSMUST00000174965 94 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Trbv7-201ENSMUST00000193339 402 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm44240-201ENSMUST00000204015 2654 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.43□□□□□ -1.86
Trim47Q8C0E3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim47Q8C0E3 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Mir669d-201ENSMUST00000104644 121 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Mir1187-201ENSMUST00000116936 122 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm11792-201ENSMUST00000120640 168 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm15466-201ENSMUST00000122299 333 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Mir1950-201ENSMUST00000158526 74 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm24390-201ENSMUST00000179578 62 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Mir6916-201ENSMUST00000184514 63 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.42□□□□□ -1.86
Trim47Q8C0E3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm26326-201ENSMUST00000083070 129 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm24615-201ENSMUST00000083268 113 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Gm23247-201ENSMUST00000083373 107 ntBASIC3.42□□□□□ -1.86
Trim47Q8C0E3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm24598-201ENSMUST00000122510 74 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm23898-201ENSMUST00000158111 103 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm43977-201ENSMUST00000203970 189 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 AF357341-201ENSMUST00000083088 75 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm26126-201ENSMUST00000083188 164 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.41□□□□□ -1.86
Trim47Q8C0E3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Trim47Q8C0E3 Mir374b-201ENSMUST00000102314 95 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm22658-201ENSMUST00000104196 155 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm15272-201ENSMUST00000120865 233 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm25888-201ENSMUST00000157778 302 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm22011-201ENSMUST00000158790 123 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm25449-201ENSMUST00000179389 79 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Mir8096-201ENSMUST00000184526 127 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm44024-201ENSMUST00000203008 476 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm23615-201ENSMUST00000082602 65 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Snora41-201ENSMUST00000082668 132 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Gm24527-201ENSMUST00000082920 107 ntBASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trim47Q8C0E3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim47Q8C0E3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Gm23083-201ENSMUST00000157851 116 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Gm23858-201ENSMUST00000158384 106 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Gm28669-201ENSMUST00000188400 100 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Mir184-201ENSMUST00000083662 69 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Gm26109-201ENSMUST00000083970 70 ntBASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim47Q8C0E3 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm13885-201ENSMUST00000117569 187 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm26425-201ENSMUST00000122529 82 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Mir6928-201ENSMUST00000185166 70 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm18346-201ENSMUST00000216782 325 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm23293-201ENSMUST00000082552 104 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.38□□□□□ -1.87
Trim47Q8C0E3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim47Q8C0E3 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm11414-201ENSMUST00000121795 263 ntBASIC3.37□□□□□ -1.87
Trim47Q8C0E3 Gm26345-201ENSMUST00000157534 120 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 206.3 ms