Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Mir344e-201ENSMUST00000104677 66 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm14843-201ENSMUST00000119596 212 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm11644-201ENSMUST00000119735 150 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm15536-201ENSMUST00000121411 114 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm18665-201ENSMUST00000189783 270 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm28169-201ENSMUST00000190342 345 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm42719-201ENSMUST00000197393 355 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm25684-201ENSMUST00000083941 107 ntBASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm25889-201ENSMUST00000157775 107 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm24747-201ENSMUST00000157835 87 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm26084-201ENSMUST00000157903 104 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm16584-201ENSMUST00000159267 189 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm22853-201ENSMUST00000174974 131 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm43381-201ENSMUST00000198553 165 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm26126-201ENSMUST00000083188 164 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm23246-201ENSMUST00000083371 67 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Gm22738-201ENSMUST00000083440 147 ntBASIC2.49□□□□□ -2.01
Shkbp1Q6P7W2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm25753-201ENSMUST00000116792 121 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm13885-201ENSMUST00000117569 187 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm25323-201ENSMUST00000122555 103 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm22517-201ENSMUST00000158265 136 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm22946-201ENSMUST00000158558 82 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm22665-201ENSMUST00000158720 275 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm23005-201ENSMUST00000158950 136 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm24573-201ENSMUST00000175499 112 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm25646-201ENSMUST00000178527 79 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm8031-201ENSMUST00000213430 626 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm24615-201ENSMUST00000083268 113 ntBASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Shkbp1Q6P7W2 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm23015-201ENSMUST00000104145 128 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Snord100-201ENSMUST00000116836 74 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm24894-201ENSMUST00000122744 118 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm25828-201ENSMUST00000157087 95 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm25888-201ENSMUST00000157778 302 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm25069-201ENSMUST00000175238 86 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm22070-201ENSMUST00000178475 107 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Mir6353-201ENSMUST00000183596 113 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm27582-201ENSMUST00000184084 126 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm27959-201ENSMUST00000185172 111 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Gm37377-201ENSMUST00000191733 304 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Shkbp1Q6P7W2 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm26091-201ENSMUST00000122704 82 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23599-201ENSMUST00000157261 251 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22221-201ENSMUST00000157362 103 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23858-201ENSMUST00000158384 106 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24510-201ENSMUST00000174965 94 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25098-201ENSMUST00000177580 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23356-201ENSMUST00000177610 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24027-201ENSMUST00000177611 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22511-201ENSMUST00000177628 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22630-201ENSMUST00000177781 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23560-201ENSMUST00000177782 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25462-201ENSMUST00000177833 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm26059-201ENSMUST00000177865 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22255-201ENSMUST00000177933 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25146-201ENSMUST00000177976 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25523-201ENSMUST00000178044 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24585-201ENSMUST00000178104 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22627-201ENSMUST00000178127 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22912-201ENSMUST00000178242 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24866-201ENSMUST00000178338 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22524-201ENSMUST00000178357 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25710-201ENSMUST00000178367 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm23575-201ENSMUST00000178406 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24872-201ENSMUST00000178434 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22449-201ENSMUST00000178924 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24702-201ENSMUST00000178965 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24206-201ENSMUST00000179011 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Mir669j-201ENSMUST00000179023 121 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm24528-201ENSMUST00000179164 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm22909-201ENSMUST00000179190 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm26334-201ENSMUST00000179403 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25463-201ENSMUST00000179405 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25742-201ENSMUST00000179530 79 ntBASIC2.46□□□□□ -2.02
Shkbp1Q6P7W2 Gm25209-201ENSMUST00000179576 79 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms