Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm24131-201ENSMUST00000158539 107 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Gm43512-201ENSMUST00000198495 176 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.79□□□□□ -1.96
Best3Q6H1V1 Mir186-201ENSMUST00000083497 71 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Mir151-201ENSMUST00000083678 68 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Best3Q6H1V1 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Best3Q6H1V1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Best3Q6H1V1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Best3Q6H1V1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm24668-201ENSMUST00000158935 104 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm16546-201ENSMUST00000159442 355 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm17528-201ENSMUST00000171026 239 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm7258-201ENSMUST00000179317 300 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Gm27979-201ENSMUST00000185126 56 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.78□□□□□ -1.96
Best3Q6H1V1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Best3Q6H1V1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Best3Q6H1V1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm25323-201ENSMUST00000122555 103 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm22554-201ENSMUST00000157798 147 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm25716-201ENSMUST00000158628 104 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Mir1966-201ENSMUST00000158807 108 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm20477-201ENSMUST00000174028 280 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Mir7026-201ENSMUST00000184384 67 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm42719-201ENSMUST00000197393 355 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm23370-201ENSMUST00000199545 130 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm24261-201ENSMUST00000083744 104 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.77□□□□□ -1.97
Best3Q6H1V1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Best3Q6H1V1 Gm24375-201ENSMUST00000104397 132 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Gm22850-201ENSMUST00000157714 82 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Gm23113-201ENSMUST00000158477 99 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Gm28409-201ENSMUST00000187064 103 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Mir34a-201ENSMUST00000083559 102 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.76□□□□□ -1.97
Best3Q6H1V1 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Best3Q6H1V1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Best3Q6H1V1 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.75□□□□□ -1.97
Best3Q6H1V1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Best3Q6H1V1 Gm22477-201ENSMUST00000122569 316 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 Mir1949-201ENSMUST00000157434 141 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 Gm37116-201ENSMUST00000195161 147 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.75□□□□□ -1.97
Best3Q6H1V1 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.75□□□□□ -1.97
Best3Q6H1V1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm14937-201ENSMUST00000119709 208 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm24044-201ENSMUST00000083107 156 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.74□□□□□ -1.97
Best3Q6H1V1 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.74□□□□□ -1.97
Best3Q6H1V1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Best3Q6H1V1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm24010-201ENSMUST00000157731 282 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm25994-201ENSMUST00000175392 101 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm37557-201ENSMUST00000191640 139 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm26379-202ENSMUST00000200225 132 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Gm25627-201ENSMUST00000084003 153 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Snora33-201ENSMUST00000093556 129 ntBASIC2.73□□□□□ -1.97
Best3Q6H1V1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm24171-201ENSMUST00000104126 131 ntBASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm26018-201ENSMUST00000104406 128 ntBASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm23656-201ENSMUST00000122626 112 ntBASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm27722-201ENSMUST00000183908 76 ntBASIC2.72□□□□□ -1.97
Best3Q6H1V1 Mir3569-201ENSMUST00000185080 58 ntBASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Best3Q6H1V1 Gm25377-201ENSMUST00000104334 129 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Snord100-201ENSMUST00000116836 74 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm15069-201ENSMUST00000117792 192 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm15068-201ENSMUST00000119796 192 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm25113-201ENSMUST00000157185 143 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm25368-201ENSMUST00000158847 131 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm26360-201ENSMUST00000158872 103 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Gm27672-201ENSMUST00000183751 204 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 Mir107-201ENSMUST00000083660 87 ntBASIC2.71□□□□□ -1.98
Best3Q6H1V1 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms